Vitis vinifera (wine grape): 100257069
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Entry
100257069 CDS
T01084
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100257069
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100257069
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100257069
NCBI-ProteinID:
XP_002270112
UniProt:
A0A438GD07
D7TNE1
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All DBs
Position
1:join(11195703..11195902,11196052..11196703,11196781..11197035,11197137..11197361)
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AA seq
443 aa
AA seq
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MAAPKSNSLLLLFVVMFMVVVPTIRAHIAEYDDYWKAREKEAKTVAIDAFDPSPEDVNDD
FNKNVEKSIFGKNGTRRNLKVNKGPCKATNPIDRCWRCRRNWAMDRRRLADCVLGFGRRT
VGGKHGRLYIVTDPSDNDMLNPKPGTLRYAVIQPQPLWIVFGRSMIIKLKQELMVTSDKT
IDGRGVNVHIAYGAGITIQFARNVIIHGLHIHDIVSRPGGLIRDSVHHFGLRTRSDGDGI
SIFGSSHVWIDHNSMSKCEDGLVDAIQGSTAITISNNHFTKHNETMLLGASDGYSGDIIM
QVTVAFNHFGRGLIQRMPRCRWGFFHVVNNDYTHWNMYAVGGSAHPTIVSQGNRYVAAPL
MDPKHDAKEVTKRDHATKAEWSKWTWRSEGDLMVNGAFFVQSGVPFKKKPFSRYDMIKAK
PGKFVPRLTRYSGALTCWRTSPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacctaaatccaattcattgcttctcctgtttgtggtgatgttcatggtggta
gtcccaacaatacgagcccacattgcggaatacgatgactactggaaagcgcgggaaaag
gaagccaagacagttgcaatcgacgcatttgatcccagcccagaggatgtcaatgacgat
ttcaacaagaatgttgagaaatcgatattcggaaagaatggcacgagaaggaacctgaaa
gtaaacaagggcccatgcaaggccacaaaccccattgatcgatgctggagatgccgtcgc
aactgggcgatggatcgcaggaggctagccgactgcgtccttggttttgggcggagaaca
gtgggaggaaagcacgggaggttatacattgtgactgatccgtccgacaatgacatgctt
aatcctaagcctggaaccttacgctacgccgtcatccagccacagccactgtggatcgtg
tttgggcgcagtatgataattaagctgaaacaggagctgatggtgaccagtgacaaaacc
attgacggaaggggagtcaatgtccacatcgcatatggtgccggcattacgattcagttc
gccaggaatgtgatcatccatggcctccacattcacgacattgtttcacgcccaggagga
cttattagggattctgtccatcacttcggcttgagaaccaggagcgatggcgatggaatc
tccatctttggctcatcccacgtttggattgaccataactccatgtccaagtgcgaggac
ggcctggtcgatgccatccaaggatccaccgctatcaccatctccaacaaccattttacc
aagcacaatgagacgatgttgttaggcgcaagtgatgggtactcgggcgatatcataatg
caagtgaccgtggcattcaaccatttcgggaggggattgattcaaaggatgccaaggtgc
cgatgggggtttttccatgttgtgaacaacgactacacccactggaacatgtacgctgtg
ggtggtagtgcacatcctaccatagtcagccagggcaaccgatacgtcgctgccccctta
atggatccaaagcatgacgctaaggaggtgaccaagagagaccatgcgacgaaagcagag
tggagcaagtggacatggagatcagagggagatctgatggtaaatggagccttctttgtt
caatcgggggtgccttttaagaaaaagcctttctccagatatgatatgatcaaagcaaag
ccaggcaaatttgtgcccagactcactcgctactcaggcgcccttacttgctggcgtacc
tcaccctgttaa
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