KEGG   Vitis vinifera (wine grape): 100257283
Entry
100257283         CDS       T01084                                 
Name
(RefSeq) structural maintenance of chromosomes protein 3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100257283
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:vvi00535]
    100257283
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    100257283
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    100257283
Proteoglycans [BR:vvi00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   100257283
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_23 AAA_15 Myosin_tail_1
Other DBs
NCBI-GeneID: 100257283
NCBI-ProteinID: XP_002273318
UniProt: A0ABY9BRS3
LinkDB
Position
4:join(9077311..9077325,9077453..9077528,9092320..9092358,9092471..9092538,9092640..9092711,9093649..9093728,9093832..9093910,9094004..9094121,9094212..9094387,9098453..9098698,9098801..9098922,9100120..9100264,9107938..9108110,9108228..9108327,9108891..9109027,9109169..9109370,9111507..9111594,9111689..9111838,9113131..9113282,9113523..9113714,9113804..9113987,9114078..9114148,9114305..9114456,9120452..9120620,9120731..9120877,9123685..9123780,9124023..9124197,9130360..9130550)
AA seq 1204 aa
MYIKQVIIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARHKLG
EVEEARTKVSETSTRMYNSVLEAHEKSKDLDKTYKDLTKDVQGLNKEKESTDKQRSEAIQ
KRTQLELDDKDLREKMSVNIKAKEDAAKQLEILQREIQDSTEELHKITPLYDEKVIEEKE
ISKGIMEREKQLSILYQKQGRATQFSSKASRDKWLQKEIDDLERVRSSNMVQEKKLQDEI
HQLNAEVKERDIYIDSRKKEIELLQSLISQSRDGFNDYKAQRDKLQDERKSLWGKESELS
AEIDKLKTEVVKAEKSLDHATPGDIRRGLNSVRRICREFEIHGVFGPIFELLDCDEKFFT
AVEVTAGNSLFHVVVETDEVSTQIIRHLNALKGGRVTFIPLNRVKAPHVAYPQSSDVIPL
LKKLKFSPNYTPAFAQVFARTVICRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLKFMNIIRQNSKSINMKEDELEKVRFKLQEIDQKITELVTEQQKIDAKQAHDRS
ELEQLKQDILNANKQKESIYKALQKKEKLLADVRTQIEQLKASMAMKQAEMGTDLIDHLT
PEEKDLLSRLNPEITDLKDQLITCRTDRIEIETRKAELETNLTTNLVRRKLELEAIISSA
ETDIWSGEAELKRQELKEAKLLVEDLTQRLKRVSENIDERTKQLRKIKDEKNKLKSLEDN
YERTLQDEAKELEQLLSKRNLLLAKQEDYSKKIRELGPLSSDAFDTYKRKSIKELHKMLH
KCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGFLVMMKKKDGDHGDDDHDEDGPREADMEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEDALDFIEHDQS
HNTD
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgtatataaagcaggttattatcgagggttttaagagctacagagagcaaattgctact
gaacctttcagttcaaaagttaattgcgtagttggcgctaatggatctggcaagacgaat
tttttccatgcgattcgtttcgtactaagtgatctcttccaaaacctgcgcagtgaagat
agacatgcactacttcatgaaggtgcaggacatcaagttctatccgcttttgtggagatt
gtgtttgataattctgacaatcgcattccggttgacaaagaggaggtgcgcttacgaaga
actattggtctgaaaaaggatgagtatttcttggatggaaagcatattacgaaaacagaa
gttatgaatttactggaaagtgctggtttctctcgttccaatccttactatgttgtgcag
caagggaagatagcatcactaacattgatgaaagactctgagcgactggatctgctgaag
gaaattggtggcacccgagtttatgaggagagacgacgtgaaagtctgaaaattatgcaa
gaaactggtaacaagagaaagcagataattcaagtcgttcaatacttggatgagcgatta
aaggaactggatgaagagaaagaggaactgagaaaatatcagcagctggacaagcagcgg
aaatctctagaatacactatttatgacaaggaactccatgatgctaggcataaattgggg
gaggttgaagaggctcgaaccaaagtttctgaaacgtctacaaggatgtataacagtgtt
ctggaagcccatgaaaagtctaaggacttggataagacatataaagatctaacaaaagat
gttcaaggtttaaacaaagagaaagaatcaactgacaagcagcgatctgaggcaatacag
aagcgcacacagcttgaacttgatgataaagatctaagagaaaaaatgtctgtgaatatt
aaggccaaggaggatgcagcaaaacagcttgagattctacagagagaaattcaagactca
acagaggagcttcacaaaattactcctttgtacgatgagaaagtcatagaggagaaggag
atatctaaaggaataatggagcgtgaaaagcagcttagcattctttatcaaaaacaaggt
cgagctactcaattttctagcaaagcttcacgtgataaatggcttcaaaaggaaattgat
gatcttgaacgagttcgttcttcgaatatggttcaggagaaaaaactccaggatgaaatt
catcaactcaatgccgaggtgaaagaaagagatatctacattgatagtcgcaaaaaggaa
atcgaattgttacaatcactcatctctcagtctcgtgatggtttcaacgattacaaggca
cagagagacaagctgcaggatgagcggaagtccttatgggggaaagaaagtgaactctct
gctgaaattgataagctaaagacagaagttgtaaaagccgaaaagagtcttgaccatgca
actcctggtgatattaggagaggactgaattctgttcggaggatatgcagagagtttgaa
attcatggagtctttggtccaatttttgagttacttgactgtgatgaaaaatttttcact
gctgtcgaagttactgctggaaacagcttattccatgtggtggttgaaactgatgaagta
tcaacccagataattaggcaccttaatgcattgaaaggtggacgggttacttttatacca
ctgaatagggtgaaggctccacatgtggcttatccgcagagctctgatgtgataccttta
ttgaagaaattgaaattctcacctaattatactccagcttttgcccaggtatttgctaga
acagtgatttgccgggatttggatgtcgctacaagggttgctcgtactgatggtttagat
tgtataaccttagaaggtgatcaagtaagcaagaaaggtggaatgactgggggattttac
gattataggcgctcaaaactgaaatttatgaatataattaggcagaactcaaagtccatc
aacatgaaggaagatgagctggagaaagttaggtttaagcttcaagagatagatcaaaaa
attacagagctagtcactgagcagcagaaaattgatgccaagcaggctcatgacagatca
gaattggagcaactaaagcaggacattcttaatgctaataagcagaaagagtccatttat
aaagctcttcaaaagaaggaaaagttgcttgcagatgttcggactcaaattgagcagctc
aaagccagtatggctatgaaacaggctgaaatgggtacggatctcattgatcacttaaca
ccggaagaaaaagatctgttatcacgattgaatcctgaaataacagacctgaaagatcag
cttatcacatgcagaacggatcgcatagagattgaaacaagaaaagcagagcttgagacc
aatctaaccaccaaccttgttagacggaagctagaattagaggctataatatcttctgca
gagactgacatttggagtggggaagctgagttgaagaggcaagaactaaaggaggctaag
ttgttggttgaagatttgacgcagcggctcaaaagagtttctgaaaatatagatgaacga
acaaagcaactgaggaagatcaaagatgaaaaaaataagttaaagagtttggaagacaac
tatgagaggacgctccaggatgaagcaaaagaactagagcaattattaagtaaaagaaat
cttcttcttgctaaacaagaagattactcaaagaaaatcagagaattgggtccactatcc
tcagatgcttttgacacatacaaaaggaagagcatcaaagaattgcataaaatgcttcac
aagtgcaatgagcaactccaacagttcagccatgtaaacaagaaagcacttgatcaatat
ataaatttcacagagcaacgggaagaactccagaaaaggcaagcagaattggatgcaggt
gatgagaaaattagagaacttatatcagttctggatcaacggaaggatgaatcgatagag
cggacgttcaaaggcgttgctaggcactttcgagaagtattctctgaacttgtacaaggt
ggccatgggtttttggttatgatgaagaaaaaggatggtgatcatggtgatgatgaccat
gatgaggatgggcctcgtgaagctgacatggaaggaagagttgaaaaatacattggtgtg
aaagtgaaggtttcttttactgggcaaggggagacacagtcaatgaagcaattgtcaggg
ggtcaaaaaacagtagtagccctgacactaatctttgccatacaacgatgtgatcctgct
cctttttatctttttgatgagatagatgctgcccttgatcctcagtatagaactgctgtt
ggaaatatgattcgtcgcctggcagacatggctaatactcagttcataaccacaacattc
cgtccggagcttgtgaaagttgctgacaagatatatggggtgacacataaaaacagagtc
agccatgtcaatgttgtctccaaggaagatgcattagattttattgagcatgatcagtct
cacaacactgattaa

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