| Entry |
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| Name |
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
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| KO |
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| Organism |
vvi Vitis vinifera (wine grape)
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| Brite |
KEGG Orthology (KO) [BR:vvi00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:vvi01002]
100257420
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:vvi04121]
100257420
Enzymes [BR:vvi01000]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100257420
Peptidases and inhibitors [BR:vvi01002]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100257420
Ubiquitin system [BR:vvi04121]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100257420
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
18:join(5622612..5622877,5624603..5626253,5626347..5626435,5627588..5627673,5627809..5627971,5628092..5628212,5628748..5628905,5630037..5630121,5630211..5630423,5631106..5631167,5631264..5632047)
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| AA seq |
1225 aa
MLVPGDLGFSCLALLSLFFPVIGLVIRHKWRVAVARKEEIKRLLILASEEAARAELETAA
VSVSPQFQCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECNPPSITHQIIDESI
SSSQKAVKQEKHAIYDNRLETEGQQCVKPIETFLSEPAFSKPNCSPEVSCEEDDHIKVEF
LADGNVSDSTSKSSSTSFSGFSTSTDRAEPSDNVSVSTTSSELSDDVSVSESINSYDPEK
SDGHKSDDSAMPETISSINTHQNEPFSPEFTGLVDSVNSFTGSSKLNQIKSSCSDVETQC
RSSSSGLSIKSCNERSVAQPSTASSGFWEGTLDLNRTRNHAQDDSAQSYASGADSNISDS
ESVLRFSFNLSGSTIPPLHAEVSESKSTVLDDAHPSTLGIKKPIEGVASSEKISTLGIKK
PIEGVASSEKISTKALKFRNSPSLAFESSNLVDSGPSNDSHKLKSREVKPFSSSVSNAHP
SCSTGGDSISIDAPKARSSSSLSSERSNHVVNGKSGASHQLKSREVESLSSGASDPHLSS
STEGHSVASMRSGKSTVDSDLHLSSSTRGHPVPNVKSGKVDGVHTVAASSSQIANHSPIV
SNGLKTSVRKVVDQFRPSKLSKSLPLGVGSEIAGRCSDKGLFSYEVFVKLYIWNKVELRP
CGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLILKAKEGN
SPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGVNASGSLEEETSL
IGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDGENK
YQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFMSGTS
DKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYM
LLYARCSPRAPRLIRNAVIPRNRKLEAASSRNIVKNTTFKLRHDSIDSTAGQSMIHSKPT
AYHSRSPVDCPASFESFYSEETRFPWKQRIVEADSSSDNSSLFTEEGSCSTESNRDSTST
EDLSDYIFGYSGRGWSSPWTNSSDSDTSSSSSSLRSSPLAELNRYSSCSTETSHSQTDKA
KLVMEGDGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCRKLVSNSSSDSYCKETDKEK
VGRVNPLDSMKLGVPSRRSTRERTD |
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| NT seq |
3678 nt +upstreamnt +downstreamnt
atgcttgttcctggggatcttgggttttcgtgcctggccctgctgtcgttgtttttcccc
gtaatcggattggttatccggcacaaatggcgggtagccgttgcgaggaaggaggaaatc
aagaggcttttgattttggcttctgaggaggcagctagggcagagctcgaaaccgcggca
gtatcggtctcgccgcagttccagtgcgccgtctgttattgccccactacaacgcggtgc
gctcggtgcaaagccgttcgttattgttctggcaaatgtcaaattattcattggcgacaa
ggtcacaaagaagaatgcaatccacctagcatcactcaccagattatcgatgagagtatc
agttctagtcagaaggcggtaaagcaagaaaaacatgcaatttatgataacaggttggag
actgaagggcagcagtgtgtgaaaccaattgaaacattcctaagcgaacctgcattttct
aaacccaattgctctcctgaagtttcatgtgaagaggacgatcacattaaagttgagttc
cttgcagatgggaatgtatcagattccacttccaaatcttccagtacatccttttctgga
ttctctacgtccaccgacagagctgaaccatctgataatgtttctgtttccactaccagt
agtgaattatctgatgatgtttctgtcagtgaaagtattaattcatatgatcctgaaaaa
tcagatggacataaatctgatgattctgccatgcctgagacaatttctagtattaacaca
catcagaatgaaccattctccccagagttcactggtttggttgattctgtaaatagtttt
actggttctagtaaattaaatcagatcaaatccagctgtagtgatgttgagacacagtgc
agatcaagtagttctggtttgagcattaaaagctgcaatgaacgttcagttgcccagccg
tctacagcctcttctggattctgggaaggaactcttgatttgaataggaccagaaatcat
gcccaggatgattctgctcaatcctatgccagtggagctgatagcaatatatctgattct
gaatctgttttacgtttttctttcaacttgtctggaagtaccattcctcctttgcatgca
gaagtctccgagagtaaatccactgtgttagatgatgctcatccatctactctagggatc
aaaaagcctattgagggagttgcttcatcagaaaagatatctactctagggatcaaaaag
cctattgagggagttgcttcatcagaaaagataagtacaaaggccttaaagtttaggaac
tcaccatctttggcctttgaaagctctaatcttgtggatagtggccctagcaatgattca
cataaactgaagtccagagaagttaaacccttttcatctagtgtttctaatgctcatcca
tcttgtagtactggaggagattcaattagtattgatgctcctaaggccaggagctcttca
tccttgagctctgagaggtcaaaccatgttgttaatggcaaaagtggtgcctcacatcaa
ttgaaatctagagaagttgaatctttatcatctggtgcatctgatcctcatttatcttcc
agcactgaagggcattcagtcgcaagtatgagatctggaaagtcaacagttgattctgat
ttgcatttatcttctagcaccagaggccatccagttccaaatgtgaaatctggaaaggtt
gacggtgttcacacagtggctgctagctcctcccagattgctaatcattcgccaattgtt
agtaatggtctgaaaacatctgttcggaaagttgttgaccaattcagaccctctaaattg
tcaaaatcccttccattaggggttgggagtgagattgctggaagatgtagtgacaagggt
ctcttttcttacgaagtgtttgtcaagctttacatttggaacaaggttgagctgcgccca
tgtggcctcatgaattgtgggaacagctgttacgctaatgctgtgctccagtgcttggca
tttactccacctcttacttcttattttcttcaaggactccactccaaatcatgtttaaag
aaagaatggtgtttcacctgtgagtttgaaagtcttattttgaaggcaaaggaagggaat
tctccactttctcctcttggtatactgtcccaaataagaaatattggaagtcatcttggt
aatgggaaagaagaagatgcacatgaatttttaaggtatgctattgatgcaatgcaatct
gtttgtcttaaggaagctggggtgaatgcttcaggctctttggaagaggaaacatctctt
attggccttacctttggaggctaccttcgttcaaagataaaatgcatgaagtgccatggt
aaatctgagcggcatgagagaatgatggatcttactgttgagatagaaggagatataggt
actctggaagaggctcttcataaatttactagcaccgagattcttgatggggaaaacaag
taccaatgtagcagatgcaaatcttatgagaaagccaaaaagaagttgacagtatcagag
gctcctaatatccttacaattgcattaaagcgatttcagtcgggtaaatttggaaagctc
aataagtcgataagatttccagagatcttggacttggctccatttatgagcgggacaagt
gataaatcacctatatacaggctttatgcagtggtggtacacttggatatcatgaatgct
gcattttctggtcactatgtgtgttatgtgaaaaacatccagaacaaatggttcaagatt
gatgacagcacggtgaaacccgtggagcttgaaagagtcttaacaaaaggggcatacatg
cttctttatgcaaggtgctcaccacgggccccaagattgataagaaatgcagtaattcct
cgcaatagaaaattggaagctgcttcttccagaaacattgttaagaatactacattcaag
ttaaggcacgactccatagattcaactgctggccagtctatgatacattcaaagcccaca
gcctaccacagtagaagccctgtggactgccccgccagttttgaatcattttattcagaa
gaaacaaggtttccctggaagcaaaggattgtagaagctgactcatcaagtgacaattct
tctcttttcactgaagaaggttcgtgcagtacagagagcaaccgggattctacaagcacg
gaagacctttctgattacatatttggttattcaggacgtggttggagcagcccttggaca
aattcatctgactctgacacttcttcctcctcttcctctttaaggagttcaccccttgct
gagttgaaccgctactcttcatgttctaccgaaacaagtcattctcaaactgataaagca
aaattggttatggagggtgatgggttttgggcaaggccacccaacgggagtagcaagcta
gtggatatggagggtaagggagacattccttttttgctatctgacatcgctaaaccgtgt
agaaagttagttagtaatagtagtagtgatagttattgtaaggagactgacaaagagaaa
gtaggacgggttaaccctttggacagcatgaagttgggtgtaccttctaggagatcaacc
cgggaaagaacagattag |
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