Vitis vinifera (wine grape): 100257675
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Entry
100257675 CDS
T01084
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100257675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100257675
03036 Chromosome and associated proteins [BR:
vvi03036
]
100257675
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100257675
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100257675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
100257675
NCBI-ProteinID:
XP_002271967
LinkDB
All DBs
Position
9:complement(join(10446643..10446832,10453229..10453326,10455484..10455632,10461243..10461366,10461867..10464484,10465912..10465942))
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AA seq
1069 aa
AA seq
DB search
MASASPFPLSGTLNELHSTRNSILFGTTMGMGCDAGTSGSQIALHQYKRRKISQKNVSSL
CEVHGEVEASLPTLRSSGYYMEPCLKELAKRELMDSGFCSRVQDFTVGRFGYGRVKFLGD
TDVRWLDLDQIIRFGRHEVVVYGDEGAKPEVGQGLNKAAEVTLVLQIRSSSFEEGRLNDI
VEKLRLCTKRQGADFISFNPSNGEWKFLVHHFSRFGLSEDDEEDIAMDDVTVVQHPLETN
AHEVSDIDEATLVEPNGAVLSHSLPAHLGLDPIKMKEMRMVMFPVDEEEDHDFSGEFKQR
EQSFNKEYIRPPLHYSARRMSHKSGSSVARKTPLALLEYNPGSVDSSSSGTILMAQQNKG
MPLKTTKVEGFKLDLKHETPITESHSHNIVDAALFMGRSFRVGWGPNGILVHAGAAVGGN
DSQRVLSSVINLEKVAIDKVVRDENNKVRKELVDSCFISPLKLHKDIKHETKEVEIGSFK
LRLQNPVSNRLMLSEICRSYIGIIERQLEVPEVSSSARVVLMHQVMVWELIKVLFSAREI
SGQSKSAGADNEEDMMHDRSEGSSDVDLEALPLIRRAEFSYWLQESVCHRVQDEVSSLNE
SSDLEQILLLLTGRQLDAAVELAASRGDVRLACLLSQAGGSTINRADVAQQLDLWRTNGL
DFNFIEKDRIRLFELLAGNIHGALHGKNIDWKRFLGLLMWYQLPPDTSLPFVFRNYQQLL
VDGGAPHPVPVYIDEGPVEEAVSWSVGERYDLAYYLMLLHASEGSEFGLGKTMFSAFSST
HDPLDYHMIWHQRAVLEAVGAFSSNDLHVLDMGLVSQLLCLGQCHWAIYVVLHMPFRDDF
PYLQATLIREILFQYCESWHSQELQRQFMEDLGIPLAWLHEAMAVYFNYCGDLSRALEHY
IACANWQKAHSLFMTSVAHSLFLSAKHSEIWRLATSMEDHKSEIEHWDLGAGVYISFYLI
RSSLQEENNTMCELDSLESKNAACKDFFSCLNESLAVWGGRLPVDARVAYSKMAEEICGL
LLSDSGEGSTRDVQLSCFDTVFSAPVPEDLHSSHLQNAVALFTCSLLEV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcttctccctttccactttctgggactttaaatgaacttcatagtacaaga
aatagcattttatttggtaccactatgggaatgggctgtgatgctggaacctctggctca
caaattgcactgcatcaatacaagagaagaaaaatttctcagaagaatgtttcttctttg
tgtgaggttcatggtgaagttgaagcttccctaccgactttgcgatcttcgggttattat
atggaaccttgcttgaaggagttggctaaaagggaactgatggattctggcttttgcagc
cgagttcaagattttacagttggaagatttggttatggacgtgtcaagtttcttggagac
actgatgttagatggttggacttagatcaaataatcaggtttgggaggcatgaagtggtt
gtatatggagatgaaggtgcaaagcctgaggttggtcagggccttaacaaggctgctgaa
gtaactttggtgctacagataagatcatcaagttttgaagagggacgactaaatgatatt
gtggagaaattgaggctttgtacaaagagacagggagcagatttcatttcatttaaccca
tcaaatggtgaatggaaattcttggtacaccatttcagcagatttggattgagtgaagat
gatgaagaggatattgcgatggatgatgtgactgtagttcaacatccactggaaacaaat
gctcatgaggtttctgatattgatgaagccacactagtggaacccaatggagctgtactt
tctcattctcttcctgctcatcttgggcttgatcctatcaagatgaaagaaatgagaatg
gtgatgtttcctgttgatgaagaggaggatcatgatttcagtggggaatttaaacagcgg
gaacaatctttcaataaggaatatatacgacctcctttgcattattccgctcggaggatg
agccataaatctggttcatctgtggcacggaaaactccactagctttgcttgagtacaat
cctggtagtgttgactccagctcttctggaaccattcttatggcccaacaaaataaggga
atgcctttgaagactacaaaagtagaaggatttaagctggacctcaagcatgagacacca
ataacagaaagccattcccacaacatagttgatgcagcattgttcatgggcaggtccttt
cgtgtagggtggggccctaatggcatccttgttcatgctggtgcagcagttggtggcaat
gattctcagagggttttatcttctgtaatcaatttagaaaaggttgcaattgataaagtg
gttagagatgaaaataacaaagtaagaaaggaacttgttgattcatgtttcatttctcca
ttaaagctacacaaggatattaagcatgaaacaaaagaagttgaaattgggtccttcaaa
ttaaggcttcaaaacccagtctctaatcgtttaatgctttcagagatttgccggagctat
ataggaattattgagaggcagctggaggtccctgaggtgtcttcctccgctcgtgtggtg
ttgatgcaccaagtaatggtatgggaattgataaaagttcttttttcggctagggaaatc
agtggacaatcaaaatctgcaggagctgataatgaggaagacatgatgcatgacaggagt
gaaggttcttcggatgttgacctggaagcactccctcttattcggagagctgagttcagc
tattggttgcaagagagtgtttgccatcgggtacaggatgaagtaagctccttaaatgag
tccagtgatttggaacagatattattactgctgacagggcgacagctggatgcagctgtg
gaactggccgcttctagaggagatgtgaggctagcttgtttgctgagtcaggctggtggt
tccacaataaatcgtgctgatgttgctcagcagcttgatctttggagaaccaatgggctg
gacttcaatttcattgagaaggacaggataaggctctttgagttgcttgctggtaatata
catggtgcattgcatggcaaaaacattgactggaaaaggttcctaggtttattgatgtgg
tatcaactaccaccagacacttcattgccctttgtttttcgcaattaccagcagcttctt
gtcgatggaggagctccacatcctgttccagtctacattgatgaaggacctgtagaagag
gctgtatcttggagtgtgggggaacgttatgacctagcctattatcttatgcttctacat
gccagtgaaggtagcgaatttggacttgggaagacaatgttcagtgccttctcgtcaaca
catgatccactggactaccatatgatctggcatcagcgtgcagtgttggaagcagttggt
gccttcagttctaatgatcttcatgttcttgacatgggacttgtttcccagcttctgtgt
ctagggcaatgtcactgggccatctatgtggttcttcatatgccctttcgtgatgatttt
ccataccttcaagctactctcattcgggaaattttgttccaatattgtgaatcttggcat
tcacaagaattacaacgccaatttatggaggacttaggcattccattggcatggttgcac
gaggcaatggcagtatacttcaattactgtggtgatctttcaagggcccttgaacactat
attgcatgtgcaaattggcaaaaggctcactctcttttcatgacttcagttgctcattca
ttgttcttgtcagccaaacactcggagatatggagacttgcaacttccatggaagaccat
aagtctgaaattgaacattgggacttgggagctggagtatatatttcattctatctaata
cgaagttctttgcaagaagaaaacaataccatgtgtgaattggattctctggagagcaaa
aatgctgcttgtaaagacttcttcagttgcttaaatgaatctttggctgtttggggtggc
agattaccagttgatgcaagagtggcatattcaaaaatggcggaggagatctgtggtttg
cttctatctgacagtggtgagggctcaacacgtgatgttcaattgagctgctttgacacc
gtttttagtgctccagtccctgaggatctccactcaagccatttgcagaatgcagtggcg
ctttttacgtgctctttgttggaggtgtag
DBGET
integrated database retrieval system
