KEGG   Vitis vinifera (wine grape): 100257823
Entry
100257823         CDS       T01084                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03030  DNA replication
vvi03410  Base excision repair
vvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100257823
   03410 Base excision repair
    100257823
   03420 Nucleotide excision repair
    100257823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100257823
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100257823
Enzymes [BR:vvi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100257823
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100257823
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100257823
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT
Other DBs
NCBI-GeneID: 100257823
NCBI-ProteinID: XP_002267181
LinkDB
Position
17:join(5604936..5605098,5605602..5605779,5606288..5606441,5606569..5606700,5607170..5607247,5609082..5609186,5609303..5609383,5609479..5609609,5609716..5609810,5609893..5609992,5610233..5610347,5610494..5610604,5611105..5611245)
AA seq 527 aa
MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL
DKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLA
IHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRW
VMGVISQLEDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGIFQVSTCG
FPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETMG
KLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKEH
SQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIVLFRQD
LLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYPNPH
TIVLGDRSEQKAFKYTGIMCFNPGSFSNESTFVAYRPCTQEVELSAL
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgggagcagcgacgaggaagaaggtgcagaggaagttcaagatcagaggttataccctt
aaagtggaagccctagacgagatcctttctttcttgagccacttccaagacgctgaagat
gaggccatcgatctcctcctcgacgagctcgaaaacgaatctttgaaatcttctatatta
gataaagaatcagtgcatcgggtcgtcagcctcctattggaggcagaagcagcagttgag
gaaactcccggggccatcagtactcgatctgcacttcgcatagttgatgcattcttgatg
tctaaattttgttatgatccaataaaaaagatcttctatgagaatacagggaggcttgcg
attcacggtgatgcttctgccaaatctgctttatacagaaataggtttctgttgttgttc
cagaggctttctcgtgatcagcacttttctaaacctgcattcgatactgaaatgtctcat
tttggaagctgcgagatatcaccaattcagtctttgattgggcaaacgggcaagagatgg
gtgatgggtgttatatctcagttggaagatggccatttcttcttggaagatcttactgca
tcagtggaaattaatttatctaatgcaaaaattacaacaggatttttttcagagaacaca
ataattgtagcagaaggtgagatgttcttggatggtatttttcaggttagtacatgtgga
tttcctccattagaggacagagatgaatcccttgcatcactttcgggacttgacttcttt
ggcggtggtacactaactagagaggaaactctcagacttgcaggactggaaaaaaaggct
gtgaatgacatgtttgtgatactctctgatgtttggctggacaatgaagagactatggga
aagctagcgactgtcctggatggttacgagaatgtggaggtggttccttccctatttatc
ttcatggggaatttctgttctcatccatgtaatctttcctttcattctttctcaagtctt
agattgcagtttggaaagcttggacagatgattgcatctcatccacgactaaaagagcat
agtcaatttctgtttattccaggtcctgatgatgcaggtccatcaacagtgcttcctagg
tgtgccttgcctaactatctgactgaagagttcaagaagtacattccaaatgccatattc
tccagtaacccttgcagaatcaagttttacacccaagaaatcgtgcttttccgtcaggat
cttctgtacagaatgcgccgttcatgtctagtgcctccttcaccagaagaaaccagtgat
ccttttgagcatcttgttgccaccataacacatcaaagtcatctttgccccctccctctt
agtgtacaacccattatttggaattatgatcactgtcttcacctctatccaaatccacat
acgatagttttgggtgacagaagtgagcagaaggcattcaagtacacgggaatcatgtgt
tttaatcctggttccttctcaaatgagagcacttttgtagcatatcgaccttgtacccaa
gaagttgaactgtcagccttgtaa

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