KEGG   Vitis vinifera (wine grape): 100257897
Entry
100257897         CDS       T01084                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X2
  KO
K10900  werner syndrome ATP-dependent helicase [EC:5.6.2.4]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100257897
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100257897
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100257897
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100257897
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     100257897
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII UBA_7 UBA
Other DBs
NCBI-GeneID: 100257897
NCBI-ProteinID: XP_002279606
LinkDB
Position
14:join(1991787..1992387,1992489..1992708,1992786..1992896,1993648..1993837,1994078..1994426,1994615..1994835,1995296..1995352,1995987..1996067,1996185..1996248,1996567..1996666,1996747..1996830,1997158..1997245,1997777..1997893,1998153..1998245,1998350..1998655)
AA seq 893 aa
MDGNNVHSDQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRSSRGASSNSKC
PTSTGKALDKTALISSHSLDQMRQSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLPGH
LEEQVLSFSGEGCNLKAASELSALPVCCQQELEIGKDWVQRVNSLLHKHFGILSLKSFQK
EALSAWLAHQDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVS
ACFLGSGQPDSSVEQKAMSGMYEIIYVCPETVLRLIKPLQRLAENRGIALFAIDEVHCVS
KWGHDFRPDYRRLSVLRENFSACSLKFLEFDIPIMALTATATICVREDILHSLCMSKETK
IVLTSFFRSNLRFSVKHSRTSSPSSYEKDFSELMDVYTKSKVGKKKQKIFSQELDDASDD
STSSADRSLSEADRMSPSDVENNGDGYFGENDDEANSSQENGSAASKQRQMSVEYLENEV
DLFQSVDDWDVSCGEFSGQPPTEHTFGSSETLDPSMKLDERLTLLKGPLEQGPTIIYVPT
RKETLNIAKYLCRCGVKAAAYNAKLPKSHLRRVHKEFHDNALQVVVATIAFGMGIDKLNV
RRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLSRVPTLLPSQRSEDQTKQAYKML
SDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCILCDVCVNGPPEKQNLKDEADTFMHVIAA
HYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRMLVSRIREQFQKFAATDLLWWRGLARIM
EDKGYIREGEDRIHVQIKFPKPTKLGLEFLQSTTEQTFDVYPQADMLLSTRNPKSYSTFS
EWGKGWADPEIRRQRLERRRSQRKPRKRKSRKHQPNMKTARGRLAAKLLIQKR
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggatggcaacaatgtacactctgaccaagtcattgcagagctgattgaaatgggattt
gagttttcagctgttacagaagctatagaagttgttggtccatcattagatgatgctatt
gagtttattttgaatggtcctcatagatccagtaggggggcatcaagtaattctaaatgt
cctaccagcactggaaaagctctggacaaaacagctttgatctcctcgcactctctggat
caaatgcgtcagtctagcataacagaacatctccaaccagtaggtagatccaaacggatc
agaactaattctgtatataatgcagtatcaccctatgggtcagagatgttgcctggtcat
ctggaagaacaggtgttgtcattttctggtgagggttgtaatctgaaagctgcctcagag
ttgtctgcactgccagtttgttgccaacaagagctggagattggaaaggattgggtgcaa
agagtcaatagtctcttgcacaagcattttgggattttgtccttgaagagtttccagaag
gaagccctgtctgcttggttagctcaccaagactgtcttgttcttgctgcaacaggatct
ggaaaatctctctgttttcaaatcccagcacttctgacaggaaaggttgtggtagtaatt
tcacccttgataagtttaatgcacgatcagtgcttaaagcttgcaaaacatggggtgtca
gcttgctttctggggtctggacaacctgacagcagtgtggagcaaaaagcaatgagtggc
atgtatgagataatttatgtttgcccagagacagtattaagactaataaaaccacttcag
aggcttgcagaaaatcgcggaattgcactatttgcaattgatgaagttcattgtgtttct
aagtggggccatgattttcgacccgactataggcgattatctgtcttgcgagagaacttc
agtgcttgcagcttaaaatttttagaatttgatataccaataatggcattgactgctact
gcaacaatttgtgtccgagaagatatccttcattcactgtgcatgtcaaaggaaacaaaa
attgtgctcacttcatttttccgatcaaatttaaggttttcagtaaaacatagtagaaca
tcatctccatcttcttatgagaaggatttctctgagttgatggatgtgtacacaaagagc
aaggttggtaagaagaaacaaaaaatcttctctcaagagttggatgatgcatctgatgac
tccaccagctctgctgataggagcttatctgaggcagatagaatgtctccaagtgatgtg
gaaaacaatggtgatggctactttggggaaaatgatgatgaagcaaattcatcgcaggaa
aatggctcagctgcttcaaagcagagacagatgtcagtcgaatatctggaaaatgaggtt
gacctctttcagagtgtagatgactgggatgtttcctgtggtgaattctctggacaacct
cctactgaacatacatttggctcatctgagacattggatccatcaatgaaactggatgaa
agattgacgcttttgaaggggcctttagaacaaggaccaactatcatatatgttcctact
agaaaagaaacattaaacatagcaaaatatctttgtcggtgtggtgtaaaggctgctgct
tacaatgcaaagttgccgaaatcacatctaaggcgtgttcacaaggaattccatgataat
gctttacaggttgttgttgcaacaattgcttttggaatggggattgataagttaaatgtc
cgaagaatcatccattatggttggccacagagtttagaagcatattatcaagaagcaggt
cgagctgggagggacgggaaattagcagattgcattctatatgctaacctttcaagagta
ccaactcttttgccaagtcaaagaagtgaagatcagacaaaacaagcatataagatgtta
tctgattgcttcagatatggaatgaatactacatgttgtcgagccaaaacacttgtggag
tactttggggaggatttttgtcatcaaagttgtatcttgtgtgatgtgtgtgttaatgga
cctcctgaaaagcagaatttgaaagatgaggcagatacttttatgcacgtgattgctgct
cattatgggaagagcagttttgtggatgatttgtatgatggtgtgatatatggtgatgtt
gaacagcagagattcatggataaaccaaatctcaggatgcttgtcagtagaataagagaa
cagtttcaaaaatttgcagcaactgatctgttatggtggcgaggtcttgctcgaatcatg
gaagataaagggtacatcagagagggagaggacaggatccatgtccagataaaatttcca
aagccaacaaaactgggactggagttcttgcaatccacaacagagcaaacattcgatgtt
tatccccaagcagatatgctgctctcaacgagaaaccccaaatcttattccactttctca
gaatggggaaaaggctgggctgatcctgagattcgtcgccagcgcttagaaaggaggcga
tcccaaagaaagcctaggaaaagaaaatcaagaaaacatcaacccaacatgaaaacggct
cgtggaaggttagcagcaaaactcttaatacagaaacgataa

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