Vitis vinifera (wine grape): 100258001
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Entry
100258001 CDS
T01084
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100258001
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100258001
Ubiquitin system [BR:
vvi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
100258001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
SurA_N_2
CENPU
DUF7194
DUF6865
DUF4764
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
100258001
NCBI-ProteinID:
XP_002267732
UniProt:
A0A438F4S6
LinkDB
All DBs
Position
7:join(2809205..2809308,2809916..2810789)
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AA seq
325 aa
AA seq
DB search
MEDTQEKDGKPPEEFPEDTHEKKRETLDEMLSRHRKEISQLQNKEAAMKKAAAKGSKAEQ
KAKKKQVEDEISQLSSDLKEKQAAELASIGYSSGSGKEKSNLDNLVKAIAGVSVTSQAEH
SRPSKSAKRREKRAQQEAAREQRIQEEQSNIVSDRMIENEILEKKLEPLGLAVNDIKPDG
HCLYRAVEDQLALLSGGSSPYTYQELREMVAAYMRKHASDFLPFFLSETEGDSDISLAER
FENYCKEIESTAAWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDVGRTDTSNQS
IMLSYHKHAFGLGEHYNSVIPGLVR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaagacacccaagaaaaagatggcaagccacctgaagaatttccagaagacacacat
gaaaagaaaagggaaactcttgatgaaatgctttccaggcacaggaaagagatatcccag
ctgcagaacaaggaagctgcaatgaaaaaggcagctgccaaaggaagcaaggctgaacag
aaagctaagaagaagcaggtggaggatgagatctctcaactttcctctgatctcaaagaa
aaacaggcagcagagctggcttcaataggctatagtagtggcagtggaaaggagaaatcc
aatcttgacaatttggtgaaagctatagcaggagtttctgttaccagccaagctgagcat
tcaagacccagcaagagtgccaagaggcgtgagaaaagagctcaacaagaagcagcaaga
gagcaaaggatccaggaagagcagagcaatattgttagtgatcgaatgattgaaaatgaa
atattggaaaagaagcttgaaccccttggattggctgtgaatgacataaagccagatggg
cactgcctctatcgagcagttgaggatcagctggcccttctctcaggaggttcttctcct
tacacgtatcaagagcttcgagaaatggtggctgcttatatgagaaaacatgcatctgat
ttcctcccatttttcctgtcagagactgaaggagactctgatatttcacttgcagagaga
tttgagaattactgcaaagaaattgaatcaacagcagcgtggggaggacaactagagctg
ggtgccctaactcactgtctgaaaaaacacattatgatattttcaggatcattccctgat
gtggagatggggaaggaatataaatctgacgttgggaggactgatacatccaaccagagc
attatgctgtcataccacaagcatgcctttggactcggcgagcattacaattctgtgatc
cctggcttggtgagatag
DBGET
integrated database retrieval system
