KEGG   Vitis vinifera (wine grape): 100258211
Entry
100258211         CDS       T01084                                 
Name
(RefSeq) ras-related protein Rab5
  KO
K07887  Ras-related protein Rab-5A
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04144  Endocytosis
vvi04145  Phagosome
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100258211
   04145 Phagosome
    100258211
   04148 Efferocytosis
    100258211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100258211
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100258211
   04031 GTP-binding proteins [BR:vvi04031]
    100258211
Membrane trafficking [BR:vvi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100258211
 Endosome - Lysosome transport
    100258211
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100258211
  Exosomal proteins of other body fluids (saliva and urine)
   100258211
  Exosomal proteins of colorectal cancer cells
   100258211
  Exosomal proteins of bladder cancer cells
   100258211
GTP-binding proteins [BR:vvi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100258211
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase TsaE AAA_24 AAA_16 ABC_tran
Other DBs
NCBI-GeneID: 100258211
NCBI-ProteinID: XP_002272169
UniProt: A5AX18
LinkDB
Position
4:join(11807801..11807839,11807920..11807997,11808335..11808502,11808862..11808910,11810659..11810732,11814185..11814278,11821430..11821530)
AA seq 200 aa
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMAL
AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLPRAQPAQNP
AGMVLVDRPAESSQAASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgaccatcggccacaacaatctcaatgcaaaattggttcttcttggtgacatggga
gccggaaagtccagtctcgtcttgcgctttgtcaagggccagtttcttgaattccaggaa
tctacaattggagcggcgttcttttcacagacactagcggtaaatgatgccacagtgaag
tttgagatatgggacacagctgggcaggagaggtaccacagcttagctccgatgtactat
agaggtgctgctgcggccataattgtctatgacattactagcacagagtcatttgcacgg
gctaagaagtgggtgcaagaacttcagaaacaaggtaaccctaacatggttatggcgctt
gctgggaacaaagctgatttagaagataagaggaaagtgactgctgaagaggcacgtgtc
tatgctgaagaaaatggccttttcttcacggagacctctgccaaaacagccgtaaatgtc
aatgatacattttatgaaatagctaagagattgcccagagctcagcctgctcagaatcca
gctgggatggttctggtggacagaccagcggaaagttcccaagctgcatcatgctgttcc
taa

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