Vitis vinifera (wine grape): 100258250
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Entry
100258250 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100258250
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100258250
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
100258250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_Vps41
Keratin_matx
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
100258250
NCBI-ProteinID:
XP_002269069
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All DBs
Position
15:complement(13773695..13774723)
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AA seq
342 aa
AA seq
DB search
MTDALSPPPAWFPGIFPDEGVTRENSSSSSSKEGFSTSSIITVILVLSSAFFVSIILYLL
LRYLSRRCSERLHSDDVVLPPVDSDRRFSSRRVSPEDLSLIDSLPLFTFGSVRGRNSSSE
GDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADFMKAIL
ASTNAGDSFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHESEVTVASTHRRGGSES
SAAEKDKDDAGAQSNQLAPEPPGPSTAAEVASGRSWLKDYVDRLSSTASLSISSRALSFR
SSGRFFTGSSRRNETASVGEWDLEANRVGEEISEMFRWFSGI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgctctgtccccgcctccggcatggtttcccgggatttttccagatgaaggc
gtcacacgggaaaactcttcgtcttcgtcttccaaggagggtttcagcactagcagcatt
attactgtgattctcgtcctctcctctgcgtttttcgtctctatcattctctatctcctc
cttcgctacctcagtcgccgttgtagcgaacgcctccactctgacgacgtcgtgctccca
cctgtcgactctgaccgccgcttctccagtagacgcgtgtcgccggaagacttgtcgctg
atcgattctctgcctctcttcactttcggctctgtcaggggccgcaactcatcctccgaa
ggcgattgcgccgtgtgtctctccaagtttgagcctcacgatcagcttcggctgcttccg
atctgctgccacgcgttccatgctcgatgcatcgacacgtggctggcatccaatcagacg
tgtcctctgtgtcgatctccgatattcgcgacggaagcggattttatgaaggccatactc
gcgtcgacgaacgctggcgatagtttccggatcgagctcggttcagtgagtcggcggcga
tcggcgtcggaatccggagaggcgagacgatcgtactctgtaggctcgttcgactacatc
gtcgatcatgagtccgaggttactgtggcctccacccatcgacgaggaggctctgagagt
agcgcagcggaaaaagacaaggatgacgccggagctcagtcgaatcaacttgcgccggag
cctccggggcctagcaccgcggcggaggtagcttcaggacgaagctggttgaaggattat
gtagacaggttgtcttcgacggcgtcgttgtcaatctcctcacgtgcgctatcgttccgg
agctccggcaggtttttcaccggaagcagtcgccgcaatgaaactgccagcgtcggcgag
tgggatttggaggcgaatcgggttggagaagagataagcgaaatgtttcggtggttttcg
gggatataa
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integrated database retrieval system