KEGG   Vitis vinifera (wine grape): 100258308
Entry
100258308         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100258308 isoform X2
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100258308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100258308
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100258308
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_WDR75_2nd WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 100258308
NCBI-ProteinID: XP_002266770
LinkDB
Position
14:complement(join(14766480..14766688,14767688..14767889,14768976..14769142,14770605..14770737,14781733..14781862,14782832..14782917,14783686..14783764,14784038..14784204,14784680..14784724,14785616..14785756,14786187..14786264,14786414..14786532,14787160..14787568,14790025..14790201,14792901..14793086,14793186..14793305))
AA seq 815 aa
MIKGGKSLVSSPPVFSNDAKKLLVCTGCTVSIFSTSTSLQITELEGHTALVTSVVVVPAF
TPSSKILCYCWTSSLDGTVRYWDFSLPELMKTVDIRLPIFSMVIPGILSQLAETDGKTPN
LFAYLSVENTKIQDDQPKVHRKILKCNLTKSRLAAGVILAETQQPELITISSSGKFFGVR
NKRKLHVWEVIAHDHEGAPIKKITLHHTKNLTVFAFHPTERIVAAGDVTGRILIWRSFGR
RTFSMGDGLMNGRAMNNEDERPGVRGDDDADSCATWHWHSAEVKVLSFSSDGAYLFSGGK
EGVLVFWQLDTGKKKFLPRIGSPLLYFATSLDPSLSSVSCSDNRIHLLKMPSMEILKSIS
GIKLPCSFPEIYEGLHSRFIFDQTAGLVAFRTENYCIQFYSLFDDRENFEVQICERNHQP
SDDVTVVVTLMVLSPDGSMMSTAETKFPEEGLGGLVCLKFWTSGSQSKGFILSTIIYEPH
RDAGISAIAFHPTRHMAVSSSYGGDFKIWACSHEIQQRDQTLQNSGWTCHAVGSYKRKPM
TAATFSADGSVLAIAAETVITIWDPEKNVLVAVIGETLEPITMLSFIGKSEYLVSASRGS
KSQLSLWSLSKLSESWSYKLQAEAVACVMDGSYFAVLTLLPRSSKHTELTETKIDGRDGA
ILLFNVGEPIPVTTWFVKKAKGGGLAFIHVNSASFKGNVSDGKLPPALLAYINGNHEYVL
FNPYNLEAHEPSMVVREKPVGIEDETGKFGYASIYGALPEFDAKRNQTELAPLLPSEKPW
ETIFCGSSHNLPPITKLCSAFLESLLEKRTPVISD
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgatcaaaggaggaaagagtttggtttcttcgcctccggtgttctcaaacgatgctaag
aagttgcttgtttgcaccggctgtaccgtctctatcttcagcacttcaactagcttgcag
atcacagagttggaagggcacacagcacttgtaacatcggttgtagtggttccagctttt
actccttccagcaaaatcctgtgctactgctggacttcttcactggatggaactgttcgt
tattgggatttttcactgcctgaattgatgaagacagttgatattcggttgccaatcttc
tccatggtaattccaggtatattaagccaactagctgagactgatggaaaaactcctaat
cttttcgcttatttgtctgttgaaaatacaaaaatacaagacgaccagccaaaggtgcat
cggaaaatcttgaagtgtaacttgacaaagtctcgtctagctgctggagttatattggcg
gagactcaacaaccagagttaataaccattagttcctcgggaaaattctttggagttcga
aacaagcgcaagcttcatgtatgggaggttatcgctcatgatcacgagggggctccaatt
aagaagataacattgcatcacacaaagaacttgaccgtttttgctttccatccgactgag
agaattgtagctgcaggtgatgtaactgggaggattttgatttggagaagttttggtagg
agaacattctctatgggtgatggactaatgaatggaagagcaatgaacaatgaagatgaa
aggcctggggttaggggtgatgatgatgctgattcttgtgccacttggcattggcactct
gctgaagtgaaggtgctgtctttctcgtctgatggggcgtatttgttttcaggtggaaag
gaaggagttcttgtgttttggcaactggacacaggaaaaaagaaatttctaccccgaatt
ggatctccacttttatattttgcaacttcactagatccttcactttcctctgtatcttgt
tcagataatcggattcacctgctgaaaatgccttcaatggaaatcttgaagtccatatct
gggatcaagcttccttgttcatttccagagatatatgaaggtttacatagccggtttata
tttgatcaaactgctggcttggttgcctttcgtacagagaactactgcatccaattttac
agcttatttgatgatcgtgaaaattttgaggtccaaatctgtgagagaaaccatcaacca
agtgatgatgtcacggtggtagtgactttgatggtcctctccccagatgggtctatgatg
agtacagctgaaaccaagtttcctgaagaaggattaggaggccttgtttgtcttaaattt
tggacatctggttctcaaagtaaagggttcatcttatccaccatcatttatgaacctcac
agggatgctggtatttctgctattgcttttcatcctacccgtcatatggccgtcagctct
tcatatggtggtgacttcaagatttgggcttgcagtcatgagattcagcaaagagatcaa
acgcttcagaattctggctggacatgccatgctgttggttcatataaaagaaagccgatg
acagctgccacattttctgccgatggttctgttctggccattgctgcagaaactgttatc
acaatatgggatccagagaagaatgtccttgtggctgttattggagagactctggagcca
atcacgatgttgtcatttattgggaagtcagagtatcttgtgtctgcatccagaggttca
aaatctcaactgtctctttggagcttgtcgaaactgtctgaatcttggtcatataagctt
caagcagaagctgtagcctgtgtgatggatggttcttattttgctgttctcacccttctt
cctcgatcatccaagcacactgagttgactgaaactaagatagatggaagagatggggcg
attttattattcaatgtgggagaacctattcctgtcactacctggtttgtaaagaaggcc
aagggagggggacttgcctttattcatgtaaattcagcttccttcaaagggaatgtttcg
gatggaaaactgcctccagcattgcttgcatatataaatggcaaccatgagtacgttctc
tttaacccatacaacctagaagcacatgagcccagcatggtggttcgagagaaacctgtt
ggtattgaggatgaaactgggaaatttgggtatgcatcaatctatggggcattaccagag
tttgatgcgaagagaaatcagactgaattggcaccacttttgccatctgaaaagccctgg
gagaccatattttgtggatcatcacataatcttccacccatcacaaaattgtgttcggcc
ttcctggaatctttgctagaaaagagaacgccagtaatctctgattga

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