KEGG   Vitis vinifera (wine grape): 100258398
Entry
100258398         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100258398
  KO
K04485  DNA repair protein RadA/Sms
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100258398
DNA repair and recombination proteins [BR:vvi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     100258398
SSDB
Motif
Pfam: AAA_25 ATPase ChlI DnaB_C Zn_ribbon_LapB Lon_C NACHT AAA_16 AAA_22 AAA SLFN-g3_helicase AAA_19 NTPase_1 AAA_29 ABC_tran Zeta_toxin nSTAND3 Isochorismatase AAA_30
Other DBs
NCBI-GeneID: 100258398
NCBI-ProteinID: XP_002277638
UniProt: F6HY77
LinkDB
Position
9:join(2932608..2933314,2933880..2933935,2934208..2934266,2934358..2934429,2935241..2935324,2935435..2935542,2935981..2936043,2936845..2936925,2937898..2937963,2938789..2938944,2939552..2939629,2941229..2941267,2941488..2941570,2941888..2941960,2942575..2942739)
AA seq 629 aa
MQISDMRALRTFYTQKHLFNPKKHIPISLSPLISFQSLQNPKFSRHFRCTNHRRSEESTS
LDADSPSIGIGSSSPDTETNSSRRRTWTVFNTEGSQYSDRQESGSRSGAERSEVSVNKGF
GSVEKARFGGRYGLASSDGGVVRGRKKGKSKVCWVCSDCGYSDGQWWGACRECNKVGTMK
QFSAGESGNGGSRVSGFEVSDNVVRSWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPF
GYEVARVLGGGLVPGSLVLVGGDPGAGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESV
EQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGL
SQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLL
RSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIMDGSRSFL
LEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAG
DLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAA
EKSLPTLEDMNIEIVGCRNMKEVINTVFV
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgcaaatctcagatatgcgagctctcagaacattctacacccaaaaacaccttttcaat
ccaaaaaaacacatacccatttctctctctcctctcatctccttccaatctctccaaaac
cctaaattttcccgccatttccgttgcaccaaccaccgccgcagcgaagaatcaacgagc
cttgacgccgattctccgagtatcgggatcggttcaagttcacctgatacagaaaccaat
tcaagcagacgtagaacttggaccgtgttcaatacggaaggcagtcagtacagtgaccga
caagaatctgggtcgagaagtggagctgaaaggagcgaggtttcggtaaataagggtttt
gggagtgtggagaaggcgagattcggtggtaggtatgggctagcttcgagcgatggcggt
gttgtgaggggtaggaagaaggggaagagcaaggtttgctgggtgtgttcggactgtggg
tattcggatgggcagtggtggggggcgtgtagggagtgcaacaaagtgggtacaatgaag
cagttttcagcaggggaaagcggcaatggtggctcgagggtgagcgggttcgaggtgtca
gataatgtggttcgatcgtggttaccccagcagcccactgaggtgcaacctttgagattg
acggatgtgaaccgggggattaatcagatgaattggaggattcccttgcatgggcccttt
ggatatgaagttgctagggttcttggtggtggtcttgtaccaggttctttggttttggtt
gggggtgatcctggtgctggcaagagtacactgttgttacagattgctgcaataatagct
gaagggcatgatattggtggatcaagtccagttgtgtatgtatctggtgaagagagtgtc
gaacaaattggaaatagagctgaccgcatgaggattgacacagaagagcttttcttatat
tcaagtactgatattgaggacatattgggacaagttcatcttctttcccccagggctcta
gttgttgattccattcaaactgtatatttgaaaggagtcatcggaagtgcaggaggtctc
tctcaggtgaaagaatgcacatcagccttgctgcgttttgctaagaagactaacatccct
gtgtttttgattggacatgtgacaaaatctggggacatagctgggcctcgtgtcttggag
cacattgttgatgttgttttatatatggaaggggagaagcactcatctcatcgattgctt
cggtctgtgaagaatcggtttgggtccactgatgagcttggagtgtttgaaatgacacaa
ttgggactgcaagttgtttcaaaccccagtgagctgttcttaagtgagcagaactcagat
tcagagattttaactggacttgcggttgctgtaattatggatggatctcgatcttttctt
ctggaaattcaggcattatgtctatctggatcaacagttgcaaggcaagttaatggggtt
ccagcgagcagagctgacatgattattgcggttctcatgaagcaagctggtctaaagctc
caagacaatggcatctttttaaatgtcgtaagtggcgtgacactggcagagaccgctggg
gatcttgctgtagcagctgcaatttgcagcagcttcttggagtttcctattcccaatggc
attgcattcattggagaaatcggccttggtggtgagcttcgcacggtacccagaatggag
aaaagggtgaacacagtagcgaaactgggatacaaaaaatgcatagtcccaaaagcagct
gaaaaatctctaccaactcttgaggatatgaacattgagattgtgggctgcaggaatatg
aaagaggttatcaacacagtttttgtctga

DBGET integrated database retrieval system