Vitis vinifera (wine grape): 100258584
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Entry
100258584 CDS
T01084
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100258584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100258584
Spliceosome [BR:
vvi03041
]
Common components
Common spliceosomal components
SR proteins
100258584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
100258584
NCBI-ProteinID:
XP_002277105
LinkDB
All DBs
Position
8:join(15065078..15065184,15066158..15066197,15066360..15066455,15067977..15068176,15068318..15068407,15068680..15069070)
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AA seq
307 aa
AA seq
DB search
MPRYDDRYGNTRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA
RYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPRKLSRHGRSYSRSPVRSRHGRSRSRSYSPSRSYSRS
RSPPKRDRSIERDKRSGSPRYRSPEPKRRSTPTSKPRKRSPTPEDSRPQERISPNVYKRE
QPEYSQSPREKSRSPVSSERDSPVARRYRSPSDANGRSRSQSPRDERSPLDEDEDNNSRS
PRGSESP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcgatatggtaatacacgtctttatgttggtcgcttgtcttca
agaacacgtacacgtgatctagagagcctcttcagcagatacgggagagtacgagatgtg
gatatgaagcacgacttcgcctttgttgaattcagtgatccccgagatgctgatgatgca
agatataacttaaatggacgagattttgatggaagtcgtatcattgtggaatttgcgaaa
gggggaccccgtggtggatcaggtggttctcgagaatatctaggtcgaggtcctccgcct
gggtctggacgctgcttcaattgtggcattgatggccactgggctcgagattgcaaagct
ggagactggaagaataagtgttatcggtgtggagaaagaggtcatattgaaagaaactgc
cagaacagtcccaggaagctcagccgacatggacggagttactcacgatctccagttaga
tctcgccatggcaggagccggagccgaagttatagcccaagtcgcagttacagccgatcg
agatctcctccaaagagagatcgaagcattgagcgagacaagaggtcagggagccctcgg
tacaggagccctgagccaaagaggaggagtacacctacatccaaaccaaggaagcgcagc
ccaacgcctgaagacagcaggcctcaagaaagaatcagccctaatgtttataaaagagaa
cagccagagtacagccaaagccccagggagaagagcagaagccctgttagttctgaaagg
gatagccctgtggcgaggaggtaccgaagcccttctgatgctaatgggcgaagtcgcagc
cagagtccgagggatgagaggagtcctctagatgaagatgaagataataacagtcgctcc
ccaagaggtagtgaatccccttga
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