Vitis vinifera (wine grape): 100258649
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Entry
100258649 CDS
T01084
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
vvi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100258649
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100258649
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvi01009
]
100258649
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100258649
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100258649
03041 Spliceosome [BR:
vvi03041
]
100258649
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100258649
Protein phosphatases and associated proteins [BR:
vvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100258649
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100258649
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100258649
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100258649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100258649
NCBI-ProteinID:
XP_010660234
UniProt:
A0ABY9D6Y9
LinkDB
All DBs
Position
14:complement(join(9849451..9849474,9878377..9878643,9878970..9879529,9892278..9892452))
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AA seq
341 aa
AA seq
DB search
MDPSVLDDIINRLREVRLRPGKQVQLSESEIRQLCVVSREIFLKQPNLLELCAPIKICGD
IHGQYSDLLRLFDYGGFPPQANYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAARIDDKILCMHGGLSPDLHNLD
QIRNLQRPTDVPDTGLLCDLLWSDPSNDIQGWGMNDRGVSYTFGPDKVTEFLEKHDLDLV
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPAVKKLK
FSFGSTTTTKPGNSPEVFGSTTTTKPGNTPTGVKSFLGAKV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcagttctcgacgacataatcaatcggcttcgcgaagttcgtcttcgaccc
gggaagcaggtgcagttatcggagtcagagatccggcaactctgtgtagtttctagggag
attttcttaaaacagcccaatttgttggagctatgtgcacccatcaagatttgcggtgat
atacatggtcaatattcggatcttttaaggcttttcgactatggtggattccctcctcaa
gccaattacttatttttgggggattacgtagatcgcggcaagcaaagcctagagactata
tgtcttctccttgcatataaaataagatatcctgaaaacttcttcctcttgagaggaaac
catgaatgtgcatctataaaccgtatatacggattttatgatgagtgtaagagaagattt
aatgtcaggttgtggaagatcttcactgattgttttaattgtctgccagtggcagcccgg
attgatgataaaattctctgcatgcatgggggactttcccctgatttgcataatttggat
cagattagaaatttacaacgcccaactgatgtaccagacacaggattgctctgtgatctt
ctctggtcagatcccagtaacgatattcaaggttggggaatgaatgacaggggagtttct
tatacattcggccctgacaaagtgacagagtttcttgagaagcatgatctggaccttgtt
tgtcgtgctcatcaggttgtagaggatggttatgaattctttgcaaaccggcaacttgta
accatattttcggcgcctaattattgtggggagtttgataatgctggtgccatgatgagt
gtggacgacactctaatgtgctctttccaaatattaaaacctgcagttaagaagttaaag
ttcagctttggaagcactactaccactaagcctggaaattctccagaagtctttgggagc
acaactacaactaagccaggaaacactccaactggagtcaagtccttcctcggtgcaaaa
gtatga
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