Vitis vinifera (wine grape): 100258708
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Entry
100258708 CDS
T01084
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100258708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100258708
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100258708
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
U-box type E3
100258708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
HEAT_EZ
zf-C3HC4_4
Arm_2
zf-Nse
KAP
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100258708
NCBI-ProteinID:
XP_002283992
UniProt:
F6GV22
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All DBs
Position
6:complement(join(5528876..5530084,5530489..5530941,5531313..5531429,5534313..5534582))
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AA seq
682 aa
AA seq
DB search
MEEAKGAPVQELIDTVSKISSISDYRCTVRKEYCNLARRLKLLIPMFEEIRDSKEPIPEE
SLKALVSLKEALESAKELLRFGSEGSKIFMVLEREQVVSKFHEVTANLEQALSGISFEKL
DITDEVKEQVELVLSQFRRAKGRADATDAELYEDLVSLYNKSTDAATDPAVLRRLAEKLQ
LMQIDDLTQESLALHEMVTASSADPGESIEKMSMLLKKIKDFVQTENPDLTATHGKSLPS
SCSGQISTDGNHKSPVIPDDFRCPISLELMNDPVIVSTGQTYERSCIEKWLEAGHGTCPK
TQQTLSSQALTPNYVLRSLIAQWCESNGIEPPKRPSSSRPSKTASSCSPAERTNIEILLN
KLRSGSPEDQRNAAGEIRLLAKRNADNRVAIAEAGAIPLLVNLLATPDSRTQEHAVTALL
NLSICEDNKSSIINSGAVPGIVYVLKRGSMEARENAAATLFSLSVVDENKVTIGASGAIP
PLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALA
ILAILASHPEGKAAIGSSEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQHHLAEAQEL
GVMGPLVDLAQNGTDRGKRKAAQLLERMGRFIEQQQQQQALVQAQAQAQAQAQAQAQPQA
HTHTHTESPHTQLSTLMNAVDG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcaaaaggagctccagtacaggagctgatcgatacagttagtaagatatcg
tcaatctcagattacagatgtacggtcaggaaagagtattgtaatctggcaagaaggttg
aagctgttgattccaatgtttgaagagattcgggacagtaaagagccgattccagaggag
tcgttgaaagccctagtctcgttgaaggaggctctggagtcagctaaagagttgctcaga
tttggtagtgaagggagcaagattttcatggtcctagaaagagagcaagttgtctccaaa
ttccacgaagtgactgctaatctggaacaagctttgagcggaatctcatttgaaaaactt
gacataacagacgaagttaaggaacaggttgagctagttctctctcagttcagaagagcc
aaaggaagggctgatgcaactgatgctgagctgtatgaggatcttgtgtccctttataac
aagagcactgatgcagctacagacccagctgtcttaaggaggttggctgagaagttgcaa
ttaatgcaaatagatgatctcacacaagaatcactggctctgcatgaaatggtcactgcc
agcagtgcagatcctggagagagcatcgagaagatgtcaatgctattgaagaaaattaag
gattttgtgcagactgaaaatccagacttgactgctacacatggaaagtcccttccttca
agttgcagcgggcaaatatctaccgatgggaatcacaagtccccagttattccagatgat
tttcgttgtccgatatccctggagctaatgaacgatcctgtcattgtttcaacagggcag
acctatgaacgttcctgcatcgagaaatggctggaagcaggacatggcacatgtccaaag
acacaacagaccctctctagccaggccctcacaccaaactatgtcttgcgtagcctcata
gcacagtggtgcgagtctaatgggatcgagccaccaaaaagacccagcagttctcggccc
agtaaaactgcatcttcctgctcaccagctgagcgcaccaacatagaaattcttctcaac
aagcttcgatctggcagccctgaagaccagcgaaatgcagcaggtgagatccgccttctt
gctaagcgcaatgcagataatcgagtggccattgccgaagcgggggccatccctctcctg
gtcaacctccttgcaacacctgattcccgcacccaagagcatgctgtcacagcgcttctt
aacctttccatatgtgaagataacaaatcaagcattattaactctggagctgtacctggt
atagtttatgtgctcaagagggggagcatggaagcacgggaaaatgctgcagctaccctc
tttagcctttcggtggtggatgagaataaggttacaattggtgcttcaggggcaatccca
ccactggtgacattgttaagtgaaggtacccagagggggaagaaggatgctgcaaccgca
ctgttcaacttgtgtatttaccaagggaacaagggaaaggcagtgagagctggagtagtg
cccacactgatgcggctgctgacagaacctggaggtggaatggtggatgaggcactggct
atacttgcaatcttagccagccatcctgaagggaaggcagccattggatcctccgaggca
gtgccagttttggtggaggttattggcaacgggtcccccaggaacagagaaaatgcagct
gcagttttggtgcatctttgtgctggtgaccaacatcatctagcggaagctcaggagctt
ggagtgatgggtccattggtggatctggctcaaaatggcaccgataggggcaagcgaaag
gctgcacagttgcttgagcgcatgggcaggtttattgaacagcagcagcaacagcaggct
ctggtgcaagctcaggctcaagctcaggctcaggctcaggctcaggcccagccccaggca
catacccacacccacacagagagcccgcacacacagctgtccacgctaatgaatgctgtt
gatggctga
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