Vitis vinifera (wine grape): 100258825
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Entry
100258825 CDS
T01084
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100258825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
100258825
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Pre-60S particles
GTPases
100258825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
MeaB
Motif
Other DBs
NCBI-GeneID:
100258825
NCBI-ProteinID:
XP_002264570
LinkDB
All DBs
Position
6:complement(join(13337102..13338251,13338344..13338423,13340736..13340792,13342174..13342267,13343032..13343118,13343209..13343310,13344018..13344241))
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AA seq
597 aa
AA seq
DB search
MGKNEKTGLGRALVKHHNQMLQQSNEKGRFYKNQHKKVLESITDVNDIDAVIQEADEAQR
LFAFDHPAPNVLINLDTNASTSNMTDEERREQQKKEEALHASSLRVPRRPPWNVGMTAEE
LDANERQALLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPL
FYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRERWAKYFRLHGILFIFWSAKAASAA
LEGKKLNVQWETQKPLQETDDADTKIYGRDELLARLQSEAEEISVRKRKSSSSSTDSSHV
QFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD
ELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL
PKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEMPP
GMTDEVSEFEDPAEPSFSETHESDASDSENPPNSESESESAPNLEHVLNDLDAFDMANGL
ASKKAPVQKTPKAPHKQHKKPQRKKDRSWRVKNDEDDGMPVARVFQKPVNTGPLNVG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaacgagaaaactgggcttggcagggcactggtcaagcaccacaaccaaatg
ctccagcagtccaacgaaaagggccgcttctacaagaaccagcacaagaaggttctggaa
tccattaccgacgtcaacgacatagacgccgtcatccaagaggccgacgaagcccaacgc
ctcttcgccttcgaccaccctgcccccaacgtcctcatcaatctggatacaaatgctagc
accagtaacatgactgatgaggaaagaagagagcaacagaagaaagaggaggcattgcat
gctagcagtcttcgagttcctcgcaggccaccgtggaatgtgggaatgactgcagaagag
cttgatgctaatgaaagacaagctcttttaatctggcggcgaagtcttgcaagacttgag
ggaaatgagaacctagtacttactccatttgagaagaacctggatatctggcgacaactt
tggcgggtgctagaacgtagtgatttgcttgtaatggttgttgatgcacgagacccacta
ttctaccgttgtcctgatcttgaggcatatgcacaagagattgatgagcacaaaaagaca
ttgcttctggttaacaaggcggaccttttaccattttctgtcagggaaagatgggcaaag
tactttcgccttcatgggattctcttcatattctggtctgctaaagctgcctctgcagct
ttagaaggaaaaaagcttaatgtgcagtgggagacccaaaagcccctacaagaaacggat
gatgctgatacaaaaatatatggcagggacgagcttcttgccagattacaatctgaggca
gaggagatatcagtgaggaagaggaaatcaagctccagtagtacagattcatctcatgtt
caatttcatggtggacatgttgctggaaattcaacatctaggagcgtagttgttggattc
gtggggtaccctaatgttgggaagagctcaacgatcaatgcattggtcggtgagaagcgg
acaggtgtcacatctactccaggcaagacaaagcattttcagacattgataatatctgat
gaactgaccctatgtgactgccctggattagtattcccatccttttctagctcgagatat
gagatgattgcttctggggtcttgccaattgatcgtatgactgagcacagagaggctgtg
caggttgtggccaatcgagtaccaagacatgtcattgaagatgtctacaaaatcactctg
ccgaaacccaagccatatgagcagcagaatcggcctcctctggcatcggaatttttgagg
gcgtattgtgcctctcgtgggtatgtagcctcaagcggtttacctgatgaaacaagagct
gcacgccaaattttgaaggattacattgatggaaaggtgccccattttgaaatgccccct
ggaatgactgatgaggtaagtgaatttgaagatcctgcagaacccagcttttctgagaca
catgaatctgatgcatctgattctgaaaaccccccaaatagtgaaagtgagagtgaaagt
gcaccaaatctcgagcatgtgttgaacgatcttgatgcatttgacatggctaatgggcta
gcttccaagaaggcccctgttcagaaaactccaaaggcacctcataaacaacacaagaag
cctcagaggaaaaaggatcgctcatggagggtcaagaatgacgaggatgatggaatgcca
gtagcaagggtcttccagaagccagtgaacacgggtcctttaaatgttgggtga
DBGET
integrated database retrieval system
