Vitis vinifera (wine grape): 100258827
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Entry
100258827 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100258827
KO
K11096
small nuclear ribonucleoprotein D2
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100258827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100258827
03032 DNA replication proteins [BR:
vvi03032
]
100258827
Spliceosome [BR:
vvi03041
]
Complex A
U1 snRNP components
Sm proteins
100258827
U2 snRNP components
100258827
Complex B
U1 snRNP components
100258827
U4/U6.U5 tri-snRNP components
100258827
Complex C
U2 snRNP components
100258827
DNA replication proteins [BR:
vvi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
100258827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
100258827
NCBI-ProteinID:
XP_002268945
UniProt:
D7U296
LinkDB
All DBs
Position
7:complement(join(3586476..3586592,3586703..3586807,3587099..3587173,3588799..3588823,3589918..3590108))
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AA seq
170 aa
AA seq
DB search
MSPAKHALQQTRPDPARHDITNTSLSHCPKRSYLRIFPFSTEKKSNPSALCSISLAREND
PKLRLQMEDDATAKNEGEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCN
MVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagccaaacatgccctacaacaaacccgacccgacccggcccgacatgacata
acgaatacttccctctctcactgtcccaaacggtcataccttcgcatttttcccttctca
acggaaaagaaatcaaatcccagtgctctctgttctatttctctcgcacgagaaaacgat
ccgaagctccgtctacaaatggaggatgatgccaccgccaagaatgagggagaggaattt
agcacagggccactttctgttctgatgatgagtgttaaaaataacacacaggtactcatt
aattgccgtaacaacaagaagcttctgggtcgtgtgagagcttttgatcggcactgtaac
atggttcttgagaacgtcagggagatgtggactgaggtaccgaagactgggaaagggaag
aaaaaggctaatccagttaacaaagataggttcatcagtaagatgttcctccgaggagat
tctgttatcattgtccttaggaatcccaagtga
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