Vitis vinifera (wine grape): 100258944
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Entry
100258944 CDS
T01084
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X2
KO
K21444
poly(rC)-binding protein 3/4
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100258944
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100258944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
bZIP_C
Motif
Other DBs
NCBI-GeneID:
100258944
NCBI-ProteinID:
XP_002272224
UniProt:
F6H7A0
LinkDB
All DBs
Position
16:join(27321133..27321819,27322653..27323138,27323350..27323598,27324059..27324301,27325199..27325263,27325350..27325458,27325542..27325668,27325782..27325801)
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AA seq
661 aa
AA seq
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MDRSRSKRGYFYEQDYDSETLGRTKPRYNNNNNHGGHHYNTNSHHRRGGAGAGRASKLQD
SSVMVTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR
RRDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMV
VSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNA
IANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVST
GLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGII
ELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKEN
VITTRLLVPSSEIGCFEGRDCSLSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIK
AARDALVEVTSRLRSYLYREFFPKDMPPPSISAPGSLEASSPNNITPAREGHTASDPPTT
NYQNVQAIASVQPSKDSGGTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKL
ITRSKNKLAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFILSISEDG
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacagatctcgatcgaaaaggggctatttctatgagcaggactatgattcagaaact
ctaggaaggaccaaacccaggtacaacaacaacaacaaccacggcggccaccactacaac
accaatagccaccaccggcgtggaggcgccggcgccggacgggcgtcgaagctgcaggac
tcgtccgtaatggtgacgacgagctaccggattttgtgccatgacgtcaaggccggcggc
gtaattggaaagtccggcagcattatcaaatcgattaggcagcataccggagcttggatc
aacgtccatgaattgattcccggcgacgaggagagaattattgagatttctgatactcgc
cggcgagacccagagggacgaatgccccaattctcgccggcgcaggaggcgttgttcatg
attcatgataggattttggagagtgatgctgggtttggaaatgggtttggtgggaatggt
gacgatgatgatgatttcgggccgcgcggcggcggaaaccgggtggcaacgaggatggtg
gtctctaggatgcatgtggggtgtttgttgggaaagggagggaagataattgaacaaatg
aggattgagaccaagacccagattaggattctgcctagagatcacaatcttccccgttgt
gtttccatgtccgaggaaatcgtgcaggtggtgggtgatgtgaatgctgtgaagaatgca
attgcaaatatttcttcacgcctgagggagagccagcatcgggaccgcagtcatttccat
ggacgaatacagtcatctccagagcggttcttcccccctgatgacgattatagtcacatg
aataatgcacctcgccgtatgcccattgatgggaactcttttggttcacgtgtatctact
ggtttggtgggcaccagaagcaatagctttgcctcccgcacatctggttacacacttgaa
tctggagctgctcctattgctgataatgcacagcaatttttaggtgaggatattgtgttt
cgaatactttgcccagttgacaaggttgaatgtgttgttggggagtcagatgggattata
gaattgcttcagaatgaaatcggtgtagatgttaaggttgctgaccatgtagctggatca
aatgaacagataattgtcattacttcagaggagggccctgatgatgagttatttcctgct
caagaagctttattacatatccaaactcgtattgttaatcttctccccgataaggagaat
gttattactactaggttacttgttccatctagtgaaattggatgcttcgagggacgagat
tgctcattatctgaaatgaggagattaaccggtgccaacatacagatcgtgccaagggaa
cagcttcctgcatttatatcagggaccgatgagcttttagagattgtaggggagataaaa
gcagctcgagatgctcttgttgaggtgacatcaagactgcggagttacttataccgggag
ttctttccaaaggatatgccaccaccttctatctctgcacctggctctcttgaggcatct
tctcccaataacataaccccagctcgtgaaggtcacactgcaagtgatcctcctaccaca
aactatcagaatgttcaagccatagcatcagtgcagccatcaaaggactctggagggact
ggtggtgaaacagtgaagcagaatgaaactgtgccaagcgttttgaacagaatccctgta
acgcttgtcaccaggagtacacttgaagttgtcataccagaacacgcagttcccaagctc
ataaccagatcgaaaaacaagcttgcccagatcagtgagtggtctggggccaatgttacc
ctgttggaagatagactggaggcgacaggaaagatcattcaaatatcaggcacccctgag
cagactgagaaggcccagagcttgcttcaaggctttattttgagcatttcagaagacggg
ccataa
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