Vitis vinifera (wine grape): 100258999
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Entry
100258999 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100258999
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100258999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
100258999
Enzymes [BR:
vvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
100258999
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
90S particles
Other 90S particles
100258999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
SPP1_portal
Motif
Other DBs
NCBI-GeneID:
100258999
NCBI-ProteinID:
XP_002273311
UniProt:
F6HKA1
LinkDB
All DBs
Position
8:complement(join(20459014..20459093,20459351..20459408,20459500..20459582,20459650..20459760,20459883..20460027,20460513..20460605,20460877..20461122))
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AA seq
271 aa
AA seq
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MVRPYTIKGHKRKRREENYDKEEVKQLLEEETAATATQDENKAEEITHELPGIPLVPFKS
NNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILHQALLTILD
SPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKREKLL
RVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVDLVFVVGAMAHGKISNDYT
DDFIAISGYPLSASWCTYLICGALMQKWNIF
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtacggccttataccataaaagggcacaagcgaaagagaagggaagagaactatgat
aaagaggaagtaaaacaattgttagaagaggagacagcagcaacagccacacaggatgag
aataaggcagaagaaatcacacatgaacttcctggtatcccacttgtcccattcaaatcg
aacaacaagactggggttacgttcattcttgagagggcttgtttagaagttgcaaaagtt
ggaaagagttatcagctactgagctcagaggatcatgcaaatttcctgaggaaaaataac
aaaaaccctgctgattacaggcctgacattctgcatcaggctctcctaactattttagac
agcccacttaataaggctgggaggctacgagctgtgtatgtaagaaccgagaaaggtgtg
ctttttgaagttaagccacatgttcgcattccaaggacatacaagcggttctctgggatc
atgttgcagctgctacagaaactgagtattactgctgttggtaagcgggagaagctttta
cgtgtcatcaagaacccagttactcaatatttacccgtcaactctcgaaaaataggtttc
tcatatagttcagaaaagtcaactccaatacgggactatgtggctgctgttagcgatgat
gtggaccttgtttttgtggttggtgcaatggcccatgggaaaattagtaatgattataca
gatgatttcatagcaatttctggctatccattgagtgcttcatggtgtacttatttgatc
tgcggggccttgatgcagaagtggaatatattttag
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