KEGG T01084: 100259206

Vitis vinifera (wine grape): 100259206

Entry

100259206         CDS       T01084

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:vvi00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100259206
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100259206
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100259206
Membrane trafficking [BR:vvi04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    100259206
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    100259206
Exosome [BR:vvi04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100259206

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank_2 BAR PH Ank Ank_5 Ank_3 Ank_4 PH_8 PH_11 BAR_2 PH_20 ANK_LRRK2 PH_13

Other DBs

NCBI-GeneID:

100259206

NCBI-ProteinID:

XP_059591910

LinkDB

Position

1:complement(join(27189474..27189588,27190317..27190807,27191674..27191767,27191933..27192078,27192747..27193085,27193165..27193251,27193440..27193664,27193774..27193905,27194062..27194277,27196038..27196079,27196167..27196262,27196391..27196438,27196588..27196653,27204755..27204799,27204978..27205040,27206278..27206348,27207521..27207621,27208751..27208827,27210777..27210821))

AA seq 832 aa
MHFAKLDDSPMFRKQIQCLEESAESLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLIQFVNIDLHDVKE
ARKRFDKASLLYDQAREKYLSLRKGTKSDIATVLEEELHNARSTFEQARFNLVTTLSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSKYEQAALNEK
MQEFKRQIDRESRWPSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSKPSGSGSQHSGQRNSSELGSGLLSRWLSS
HYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQAPERCLPISPMGSSHHRSASESSSYESTDFDHTAVEEYTSERSSAT
AHHERPSKGLQQIRSCIKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCIECSG
VHRNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNTFANSVWEELLQSRNAFQVDLVPTG
LYKSDKPQLHFISKPSHADSISIKEKYIHAKYAEKLFVRKPKDNQYPCLVTQQIWDAVRT
NDKKAVYRYIVNSEADVNVVYEQTLCNSSLTLAKVMLLQEQTNLDHSSRCLTGDSFDKSS
VSSSNAASTSEGQTMEDFDGWSLLHLACETADIGMLELLLQYGANINACDSRGQMPLHRC
ILRGKATFAKLLLTRGADPRAVNGEGKTPFELAVESNFVDSDVLALLSDSNG

NT seq 2499 nt +upstreamnt +downstreamnt
atgcatttcgcgaagctcgatgactctcctatgtttcggaagcagatacaatgcttggag
gaaagtgctgaatcattgagggagagaagtctgaagttttacaaaggatgtcgaaaatac
actgaagggcttggggaaggatatgatggggacattgcttttgcaagtgctctagaaact
tttggtggaggacacaatgatcctattagtgtggcttttggaggccctgttatgaccaaa
ttcactattgcattgagagagattgggacatacaaggaagttcttcgctcccaggttgag
cacatgctaaatgaccggttgatacaatttgtgaatattgatttgcatgatgtcaaggaa
gcaagaaagcgttttgacaaagctagcctcctatatgatcaggctcgtgagaagtatctg
tcgctgaggaaaggcacaaaaagtgatatagctactgttctggaggaggagcttcataat
gcaagatctacatttgagcaagctcgctttaatctggtaactactctttctaatgttgaa
gcaaaaaaaaggttcgaattcttggaagcagttagtgggacaatggatgctcaccttcgc
tacttcaagcaggggtatgagctgttgcatcaaatggaaccttatatcaatcaggttttg
acttatgcacaacaatcaagagaaaggtccaaatatgaacaggcagcccttaatgaaaag
atgcaagagttcaaaagacagattgatcgagaaagcaggtggccttcaaatggttctaat
gggtctcctaatggagacggtatacaagccattggcagaagctcacataaaatgatagag
gctgtgatgcaatctgcagccaagggaaaggttcaaaccatccgacaaggttacctctca
aaacgctcctcaaacctgagaggtgactggaaaagaaggttttttgttcttgatagccga
ggaatgctatattactatcgcaaacagaacagcaaaccatctggatctggcagtcagcat
tcaggtcagaggaatagttctgaacttggttctggactgttgagtcggtggctttcttcc
cattatcatggtggagtacatgacgagaaatctgttgctcatcacacagtgaacctgttg
acatcaacaataaaggttgatgctgatcagtcagatctcaggttttgtttcaggattatt
tctccaacgaagaactatactttgcaggcagagagtgcactggaccaaatggattggatt
gaaaagataacaggggttattgcttcattactgagttctcaggctcctgagaggtgtctg
cctattagtccaatgggaagcagtcatcaccgctctgcaagtgagagtagttcatatgaa
agtactgatttcgatcacacagcagttgaagaatacacatccgagaggagctcagccact
gcacatcatgagcgcccatcaaaaggtttgcaacagatacggtcctgcataaaatccgag
aagccaattgatgtattgcgaagagtatgtgggaatgataaatgtgctgattgtggggca
cctgaaccagactgggcatccttaaatcttggtgttcttgtctgcattgaatgttctggt
gttcatcgtaatcttggtgtacatatatcaaaggtaagatcgctgacacttgatgttaaa
gtgtgggagccttctgtattaactctgtttcagtctctgggcaataccttcgctaattca
gtttgggaggaactattgcaatcaagaaatgcctttcaggttgatcttgttcctacaggc
ttatacaagtcagataaaccacagttgcattttatcagcaagccaagtcatgctgattct
atttcaattaaggagaaatacatacatgcaaagtatgcagaaaagctttttgttcgcaag
ccaaaagacaatcaatatccttgtttagtgacacaacaaatctgggatgctgttcgtact
aatgacaagaaagcagtatatcgttacattgttaactctgaagccgatgtgaatgttgtg
tatgagcaaacattatgtaactcttctttaacccttgccaaagtaatgctgttgcaagag
cagacaaaccttgaccacagctctaggtgcttgacaggggattcatttgacaagtcatct
gtaagctcttcgaatgcagcaagtacaagtgaaggccagaccatggaggattttgatggg
tggtccctgcttcaccttgcttgtgaaactgcagacattggcatgctagagcttcttcta
cagtatggagcaaacataaatgcttgtgattcaagaggtcagatgccactccatcgatgt
attctgagaggcaaagctacattcgccaaactgcttctcacaaggggagcagacccgcga
gctgtaaacggggaaggcaaaaccccatttgagctagcagtagagtcaaactttgttgat
agtgatgtccttgctctattatcagactcgaatggataa

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