Vitis vinifera (wine grape): 100259344
Help
Entry
100259344 CDS
T01084
Name
(RefSeq) oligouridylate-binding protein 1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100259344
03041 Spliceosome [BR:
vvi03041
]
100259344
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100259344
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100259344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
100259344
NCBI-ProteinID:
XP_010656097
UniProt:
F6HGN2
LinkDB
All DBs
Position
11:complement(join(669847..670131,670607..670780,672684..672769,673229..673348,674251..674281,674371..674446,674551..674638,674748..674809,674879..674955,675210..675312,675659..675720,676720..676824))
Genome browser
AA seq
422 aa
AA seq
DB search
MQQQRLKQQQQALIQQSLLQQQSLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGN
IHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQP
IKVNWAYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR
GFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGT
SEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFG
FVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPGISAAD
FAAYERQMALSKMGGAQGLMHPQAQHALKQTAMGMGAGGSSQAIYDGGFQNAATTQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagagactgaaacagcagcaacaagccttgatacagcaatcgcttcttcag
cagcagtctctgtaccaccaccctggtctcttggctcctcctcagatagagcctatcttg
agtggaaatctgcctcctgggtttgattcaagtacatgccgcagtgtgtatgtgggtaat
atccacccacaggttacagaaccacttcttcaagaggttttctctagtactggtcccctc
gaagggtgcaagctcattaggaaagagaagtcatcctatggttttgtcgattactttgac
cggagatctgctgccctttctattgtgactctgaatggaaggcatctgtttggtcagcca
atcaaagttaattgggcatatgctagtagtcagagagaggatacatcaggtcattacaat
atttttgttggtgatcttagccctgaggttacagatgctacactgtttgcatgtttctct
gtttatcctagctgttcagatgctagggttatgtgggatcagaaaactgggcgttcaagg
ggttttgggtttgtttctttccggaaccagcaggaagcccaaagtgcaattaatgactta
aatggaaggtggcttggaagcagacagattcgttgtaattgggcaacaaaaggtgctgga
ggtaacgaggacaagccaaattcagatgccaaaagtgttgtggaactaactaatggaaca
tctgaagatgggaaagacaagtcaaatgatgaagctccagagaacaatcttcagtatacc
actgtttatgttggcaatcttgctccagaggttacttcagttgacctccaccgacatttt
catgcacttggcgctggagctattgaagatgttcgggtgcaacgagataaaggctttggt
tttgtgagatacagtacccatgctgaagcagctctggctattcagatgggaaatgctcgg
attctctgtggcaaaccaattaagtgctcatggggcagcaaacctactccagcagggaca
agctccacccctcttcccccaccagctgctccacatatgcctggtatttcagctgctgac
tttgcagcgtatgagcgacagatggcattgagcaaaatgggtggtgcacaaggcctcatg
catccgcaggctcagcatgccctaaagcagacagccatgggaatgggtgctggtgggagt
agtcaggcaatctatgatggtggattccagaatgctgcaacaacccagcaactcatgtac
taccagtag
DBGET
integrated database retrieval system
