Vitis vinifera (wine grape): 100259405
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Entry
100259405 CDS
T01084
Name
(RefSeq) la-related protein 6B
KO
K15191
La-related protein 7
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100259405
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
100259405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
HENMT1_C
Motif
Other DBs
NCBI-GeneID:
100259405
NCBI-ProteinID:
XP_002275950
UniProt:
A0ABY9C015
LinkDB
All DBs
Position
5:complement(join(26553673..26553924,26554281..26554418,26565703..26565771,26565856..26565903,26568376..26568475,26568578..26568657,26569046..26569117,26569239..26569333,26570002..26570083,26573330..26573758))
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AA seq
454 aa
AA seq
DB search
MAQETLDLDLPSGDLSTPSDPSSLSRNSSFSRLNAQAPEFVPRAPPRPDLPPPRLAMAPA
HGVVPVYPGPSSPFHVPIQNHHQHQQHHHHHVQYHQYHQYYGGGFGDHPEGVGQAHQASA
DSDHVAASRNGLSEEVTQKILNQVEYYFSDVNLATTEHLMRFINKDPEGYVPISVVASFK
KIKALVSSHSQLATVLRNSTKLVVSEDGKKVRRLHPLTESDMEELQSRIVVAENLPEDHC
HQNLMKIFSAVGSVKTIRTCQPQTSNGGASSAARSSKTDNMLFSNKLHAFVEYESIELAE
KAVVELNDEGNWRSGLRVRLMHRRVAKSAQARSRKGHEGEAICEEDDACTSEQLPNDKQP
EDPDVHSHEHAGEEHINDKEGAQRKGRSRGRGKGRGRGQYHHHGNRGNHVGTPPNSSINH
EQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNIA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagaaaccctagatttagatttgccttccggcgatctctctactccctccgat
ccctcctccctttctcggaactcttccttcagccgcctcaacgctcaggcgcccgagttc
gtccctcgggcgccgccgcgtcccgatctccccccgccgcgacttgcgatggccccggct
cacggcgtggtccctgtgtatcccggtcccagttcgccttttcatgtgccgattcagaac
caccaccaacatcagcagcaccaccaccatcatgtgcagtatcatcagtatcatcagtac
tatggcggcggatttggagatcatccggagggggtcgggcaagctcatcaagcttcggcc
gattcggatcatgtggcggcgtctaggaacggactctccgaggaagttactcagaagatt
ctcaatcaggtggagtattatttcagtgatgtgaacttggcgacgacagagcatcttatg
aggttcatcaacaaagatcctgaaggatatgtgccaatatccgttgttgcatcttttaag
aagattaaagccctcgtaagtagtcattcccagcttgctacagttcttcggaactcaaca
aagctggtggttagtgaagatggaaagaaagttagacgccttcatcccctgaccgagtca
gacatggaagagttgcagtctcgcatagttgttgctgaaaatctacccgaggaccattgc
caccaaaacctcatgaagattttctctgctgttgggagtgtgaagacaattcgtacctgt
cagcctcaaacttccaatggaggggcctcttcagctgctagatcctctaaaacagacaac
atgcttttcagcaacaagttgcatgcattcgtggagtacgaatccattgagctggctgag
aaagcagttgtggagctaaatgatgaggggaattggaggagtggtcttagagttcgctta
atgcatagacgagtggcaaaatctgctcaagcacgaagtagaaaggggcatgaaggtgaa
gcgatttgtgaggaagatgatgcttgtacatctgagcagctaccaaatgacaaacagcca
gaagatcctgatgtccattctcacgagcacgctggggaggagcatatcaatgacaaggag
ggtgcacaaaggaaagggcgtagtcgtgggcggggcaagggtcgtggacggggtcaatat
catcatcatggtaaccgtggaaatcatgtagggactcctccaaatagttcaatcaatcac
gaacagccagctgtagcaaagccacctcctgggccacgcatgccagatggtacgagagga
ttttctatgggccgggggaagccagtggctgttaatattgcatga
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