Vitis vinifera (wine grape): 100259448
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Entry
100259448 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100259448 isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100259448
Enzymes [BR:
vvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100259448
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100259448
Prokaryotic type
100259448
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
100259448
NCBI-ProteinID:
XP_002263416
UniProt:
D7TGT5
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All DBs
Position
12:complement(join(22578875..22578972,22579090..22579150,22580578..22580850,22581842..22581904,22582169..22582268,22582756..22582838,22583653..22583706,22586615..22586692,22595086..22595142,22596491..22596766))
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AA seq
380 aa
AA seq
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MSDINATSISESARSDSPKHLLNRRSESPQRPSKIARTDDLSDGEQQDSVASKTMTQNPR
VQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSN
VCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKAR
ERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKS
PIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDGFN
GAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTA
ASPMAPACGLYLGNVNYDLP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcaatgcgacgtctatatctgagagtgcacgatcagactctccaaagcac
ttgctcaatcgacggtccgaatctccccaacggccttcaaagatcgccagaacggacgat
ctcagtgacggcgaacagcaggactctgtcgcttccaaaaccatgacccagaaccctaga
gttcagaggtacttggttgcggttgagtatattgggactcggttctccggctcgcaacag
cagctgaattgcagaacagtggctggtgctcttcaggaagcttttcataaatttattgga
cagccggtttcgatcttttgctcaagtcgaactgatgcaggagtgcatgccttgtcaaat
gtctgccatgtagatgttgaacgcataagcaaaaggaagcctggtgaagtgttaccacct
catgaacctgcagttgttcggagagctgtgaaccatttcttacagaagaatgaaggtgac
gtaatggtgattgatgttcgttgtgttccacctgattttcatgctagatataaagctcga
gagcgaacgtacttctaccgcttgctgtctggaccagagcctttgtcaagctttgagaaa
gatcgggcttggcatgtacctgaggacctagatcttcttgctatgcagaaagcatgcagg
gttcttgttggatgtcatgattttagttccttcagggcagctggttgtcaggcaaagtca
cctatcagaactttagatgaactctgtgtttctgaggtactgccaactccatattttcca
tcaatcactgagagggcacaaaataatttcacggaggagaatccccttgcttgctccaac
aatgctgaagtgcctgatagcccttctaccgccaatcatgatagattagatggcttcaac
ggtgctggtcaaggatttggcgtaaggagaagacaccgatgctttttggtaactgcacgg
gcacgctcttttctctatcaccaggttagactgctcgtgggtgttatcaaatgtgttggc
actggagacctaacagtttccgacgtcgaaaggatcctgaacgcaaagacagtgactgct
gcaagtcccatggcccctgcttgcggtctttaccttggaaacgtgaattatgatcttccc
tga
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