Vitis vinifera (wine grape): 100259454
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Entry
100259454 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100259454
KO
K13210
far upstream element-binding protein
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100259454
03041 Spliceosome [BR:
vvi03041
]
100259454
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100259454
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100259454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
100259454
NCBI-ProteinID:
XP_002278761
UniProt:
F6H392
LinkDB
All DBs
Position
4:complement(join(708608..709777,712778..712894,713082..713153,713236..713325,713645..713928,714294..714633))
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AA seq
690 aa
AA seq
DB search
MAEEVQYSSGTDATNKRKYEDQTTPSQPSTRRPTGFSAPISTPSPDSSHAPPSYNSVPPP
ADEIQLAKQRAQEIAARLFSNASNTEAKRPRVENGAGAGGFDSGDKGFSSAPSDVGQKPM
ISTPSAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPN
SPTRLVELMGTPDQIAKAEQLINDVLSEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVG
LIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVIS
ENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQP
AYAGYSQPNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNYN
QPPASGYNQQGQGYPQDGYGGGYHAPAPQPGYGQPQPIPGYDQQQGYNSATGYGNVANPT
QEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYPPQGSNQPAYGMPPTSQ
TGFGSQPPAQSGYTTNYGPPQAQKAPANPPVYGQTQQSPSAQGGYAQPAPVQPGYPHSQQ
PPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGPSAYSAPTVTQAGYGQQPPYSGSYGGG
YSQPPMYAADATPTSQPAQQSGVAKTSPQS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaagtacagtactcgtctggtacggacgctaccaacaagcgtaagtacgag
gaccaaacgacgccgtctcagccatccactcgccgccccaccggcttctcggctccgatc
tccactccctctccagactcctctcacgccccgccctcatacaacagtgttccgcctccc
gcagatgagatccagctcgccaagcagcgcgcgcaggagatcgctgctcgccttttcagc
aacgccagcaacaccgaagctaagcgccctcgcgtcgagaatggtgccggtgctggtggg
tttgattctggtgataaggggttcagctctgctccttctgatgttggacagaagcctatg
atctcgactccttcggcaattccagtttcttatggttaccagggtacgagcaaaaagatt
gatatcccgaatgggagggttggtgttattattgggaaaggtggagagactatcaagtat
cttcagcttcagtctggagctaagattcaggtcactagggatatggatgcggatcctaat
tccccaacccggttggtggagctcatgggtactccggaccaaattgcgaaggcagagcaa
ttgattaacgatgttctttctgaggctgaagcaggggggtctggcatagtttctcgaagg
ctaactggtcaggctgggtctgaacaatttgtgatgaaagtaccaaacaacaaggttggt
ctgataattggtaaaggtggtgagaccattaaaaatatgcaagccaggacaggagctcgt
attcaggtgatacctttgcatctcccccctggtgatacatcaatggagagaactgtacaa
atagatggcaccagtgaacagattgagtctgctaaacagttggtcaatgaagtcatcagt
gagaatcgtatcagaaatccagcaatggctggaggatatcctcagcaaggctaccaagcc
cgacctccatcgggctggggtgcccctcctggtgctcctccaatgcagcaacctggttat
agctatgcgcagcctggatcctatcctggtccttcaccccagtataacatgtctcagcca
gcttatgccggctattctcagcctaatgccactggttgggaccagacggctgccccacca
agtcagcagacaactccaggaagtggctatgattactatggccaacagcagactcaacag
cagcagcaagcccatggtggtccttctggtccagctgataactctggttacaattacaat
caaccaccagcttctggatataatcaacaggggcaaggttatcctcaggatggctatggt
ggtgggtatcacgcacctgctcctcaacctggctatggtcagcctcaaccaattccagga
tatgatcagcagcaaggttataattctgcaactggttatggtaatgtggccaacccaaca
caagaggggcacactacctcctatggagctcaaggggagactggtcaagcaccaccttct
gtccagccctctgcaattggtcagcaaggatacaacactcagcagcctagtccaagccct
gcaagttatccacctcaaggatctaatcagccagcgtatgggatgcccccaacttcccaa
actggttttgggagtcaaccaccagcccagtctggctataccaccaactatggaccacca
caggctcagaaggcaccagccaatccaccagtttatggacaaacccaacagtcccccagt
gcccagggaggctatgcccagcctgctcctgtgcagcctggttatccccattctcagcag
ccgcctgctcagtctgggtatgctcaaactgattccagttcccagcgagctgcaccgtcc
agttatggaacagcagctggtcagccagggtatggaggaccttcagcttacagtgcacca
acagtgactcaggcaggttatgggcagcagcccccatacagtggctcatatggtggcggt
tattcacagcctccaatgtatgctgcggatgcaactccaacttctcagcctgcacaacag
agtggggttgccaaaacatcgccccagagctga
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integrated database retrieval system
