Vitis vinifera (wine grape): 100259460
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Entry
100259460 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100259460
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100259460
Enzymes [BR:
vvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100259460
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100259460
Prokaryotic type
100259460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TUSC2
Motif
Other DBs
NCBI-GeneID:
100259460
NCBI-ProteinID:
XP_002272379
UniProt:
F6HUT7
A0ABY9D9S3
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All DBs
Position
14:complement(join(27070059..27070129,27070734..27070771,27071727..27071810,27072087..27072196,27072415..27072525,27073761..27073839,27073994..27074076,27074217..27074272,27074940..27075870))
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AA seq
520 aa
AA seq
DB search
MAKSLPFTHVSLLFFRPKPTLSLFFKPPSLRLLTRPSSFPHLFSTTSTPHPLQYDMIISR
PAQPPPPRPRRRLTPLPNSKPNDSPDAESPDSEGFENWVDRKLSGSDDLQMDKAKRKYYN
KRRKRMYGSDSDEDGGAAQEKYVELKQEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKM
VYQLEKKYFPDHCLDKAFLEPGETNESANNAKAKKKVGKGGEKREEIGDGGDDKGLVFFE
GEKDEKVSVSAKEKELSEKKVEEFFKCLKKVPNKDVEGDRGEPYFVTRSSELPPRWDGPS
GTVVLINKPKGWTSFTVCGKLRRLVQVKKVGHAGTLDPMATGLLIVCVGKATKLVESYQG
MVKGYSGIFRLGEATSTWDADSPVIQREPWEHIKDENIKKTAASFCGEIWQVPPMFSAIK
VGGEKMYEKARRGESVELSPRRISIFKFDIERSLDDRQNLVFRVTCSKGTYIRSLCADFG
KALGSCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGYF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcactccctttcacccacgtctccctcctcttcttccgccctaaacccact
ctctccctcttcttcaagcccccatctctcagactcctcacaagaccctcctcattccca
catcttttctccactacttccacccctcaccctctccaatatgacatgatcatctcccgc
ccagcacagcccccaccccctcgcccccgccgccggctcaccccactccccaactctaaa
cccaatgactcgcccgatgcagaatcgcccgactcagaaggttttgagaattgggttgat
cggaaattgtcgggttcggatgatttgcagatggataaagcaaagaggaagtattacaat
aagaggaggaagaggatgtacgggtcggattcggacgaggatggtggtgcggcgcaggag
aagtatgtggagctgaagcaagaagtggtggagcttcgcacattgcacaagaaagaagag
gagttgtatttttacgatgctttcgcatatccatgggagaaggaaaagcattataagatg
gtgtatcaattggagaagaagtattttcctgatcattgtttggataaggcgtttcttgag
cctggagaaacgaatgagagtgccaataatgcgaaggcgaagaagaaagtggggaagggt
ggggagaagagagaggagattggtgatggaggggacgataagggtctggttttctttgag
ggggaaaaggatgagaaagtatctgtttcagcaaaggagaaagagctttcagagaagaag
gtggaggagttctttaagtgtttgaagaaagtccccaataaggatgttgaaggtgatcgt
ggggagccctactttgtgactcggagtagtgagctgcctccgagatgggacgggcccagt
gggactgttgttctgataaacaaacccaaaggatggacttcatttacggtttgtggaaag
ctccgccgccttgtccaagtgaaaaaggtagggcatgctggaactcttgatcccatggct
actggtttgttgattgtatgtgttggtaaagccactaagttggtagaaagttatcaaggc
atggttaagggttatagtggaatttttcgtttaggggaggctacttcaacttgggatgct
gattctccggttattcagcgtgaaccatgggagcacatcaaagatgagaacataaagaaa
actgctgcatcattttgtggggagatatggcaagttcctccaatgttttctgccatcaaa
gttggaggtgaaaagatgtatgagaaagccagaagaggagaaagtgtagaactttcacca
aggcggatttcaattttcaagtttgatattgagcgaagcttagatgacagacaaaatttg
gttttccgggtgacatgctcaaaagggacttatattcgatcattgtgtgcagattttggg
aaagcccttggcagttgtgctcatttagctgctctgcgaagagactcaattgggccatat
tcagcagatgatgcctgggaatttaaagatctggaagaagctatcaccaaaggttatttt
taa
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