Vitis vinifera (wine grape): 100259611
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Entry
100259611 CDS
T01084
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04141
Protein processing in endoplasmic reticulum
vvi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100259611
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100259611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vvi03110
]
100259611
04131 Membrane trafficking [BR:
vvi04131
]
100259611
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
vvi04091
]
100259611
Chaperones and folding catalysts [BR:
vvi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
100259611
Membrane trafficking [BR:
vvi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
100259611
Autophagy
ER-phagy
Other ER-phagy associated proteins
100259611
Lectins [BR:
vvi04091
]
L-type lectins
100259611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4834
DUF6556
Motif
Other DBs
NCBI-GeneID:
100259611
NCBI-ProteinID:
XP_002277666
UniProt:
F6HWL2
LinkDB
All DBs
Position
17:complement(join(51389..51532,51658..51771,51858..51929,52015..53141,54122..54191,54273..54365))
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AA seq
539 aa
AA seq
DB search
MGEGKRVSLLPLYVVFAVIACASLQLCASDSIFYESFDDDFEGRWIVSEKEDYKGVWKHA
KSDGHEDHGLLVSEKARKYAIVKELDEAVSLKDGTAVLQFETRLQNGLECGGAYLKYLRP
QDATWKSKEFDNESPYSIMFGPDKCGSTNKVHFIVKHKNPKSGEYIEHHLKYPPSVPSDK
LSHVYTAILKPDHEVRILIDGEEKKKANFLSSEDFEPPFIPAKTIPDPDDKKPEDWDERP
KIPDPNAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEIDDPEASKPEDWDDEEDGEWE
APKIDNPKCEIAPGCGEWKKPLKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPDYFELD
HPDIEPVAAIGIEIWTMQDGILFDNILITSDEKTAESYRETTWKPKFEVEKEKQKAEDAA
AGFDVPSGFQKKVFDLLYKIADISFLNAYKPKLLDLIEKGEKQPNLTIGILVSIVIVFLT
IIFKIIFGGKKPVKITRQTNNSTVAETSNDQGSSREKEEENEEEDTNAPPRKRSTRREN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagggaaacgagtttctctgctacccctatatgttgtgtttgctgtaatagct
tgcgcatcacttcagctatgcgcttctgattctatcttctacgagtctttcgacgacgat
tttgaagggcgttggatcgtttctgagaaagaagactataaaggtgtatggaaacatgca
aagagtgacggacatgaggatcatgggcttcttgtgagtgagaaagctaggaagtatgct
atagtgaaagagcttgatgaggcagtgagtctaaaggatggaactgctgttctccagttt
gagactaggctccagaatgggcttgagtgtggtggtgcatatctaaaatatcttcgacct
caggatgctacatggaaatccaaagaatttgacaatgaatctccctattctatcatgttt
ggacctgacaaatgtgggtctacaaacaaggtgcactttatcgtaaagcataagaacccg
aagagtggggaatacattgaacaccatctcaagtatccaccctctgttccatctgacaaa
ttatctcatgtctatactgcgattttgaagcctgatcatgaggtgcgaattctgattgat
ggtgaggaaaagaagaaggcaaatttcctctcatctgaagattttgagcctccatttatc
cctgctaagaccattcctgacccagatgataagaaaccagaggattgggatgagaggcca
aaaattccagaccccaatgcggtaaagcctgatgactgggatgaggatgcacccatggaa
attgaagatgaagaagcagtaaaacctgaaggatggttggatgatgaacctgaggagata
gatgatcccgaagcctccaaaccagaagattgggatgatgaggaggatggtgaatgggag
gcaccaaagatagataacccaaagtgtgagattgcacctggttgtggtgaatggaagaag
ccattgaagaggaatccagcttacaaggggaaatggcatgcccctcttattgacaacccc
aattacaagggtatttggaagcctcagcagattccaaaccctgactattttgaacttgat
catcctgacattgagcctgttgctgccattggcattgagatttggacaatgcaggatggt
atattgtttgacaatattttgataactagtgatgagaagactgcagaatcatatcgggag
accacatggaagccaaaatttgaagttgagaaagagaaacagaaagctgaggatgcagct
gctggttttgatgttccctcaggcttccagaagaaggtatttgacctcctctacaagatt
gcggatatttccttcttaaatgcatataaacccaagcttttggatctaattgagaaggga
gagaaacaaccaaacctcacgattggaatccttgtctccattgtcatcgttttcttgact
attatctttaagatcatttttggtgggaagaagccggtgaaaatcaccaggcaaacaaat
aactcaacagttgctgagacatcaaatgatcaaggaagcagcagagagaaagaagaagag
aatgaggaggaagatactaatgctcctcctcgaaagaggtctacgaggcgcgaaaattga
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