KEGG   Vitis vinifera (wine grape): 100259851
Entry
100259851         CDS       T01084                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04144  Endocytosis
vvi04145  Phagosome
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100259851
   04145 Phagosome
    100259851
   04148 Efferocytosis
    100259851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100259851
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100259851
   04031 GTP-binding proteins [BR:vvi04031]
    100259851
Membrane trafficking [BR:vvi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100259851
 Endosome - Lysosome transport
    100259851
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100259851
  Exosomal proteins of other body fluids (saliva and urine)
   100259851
  Exosomal proteins of colorectal cancer cells
   100259851
  Exosomal proteins of bladder cancer cells
   100259851
GTP-binding proteins [BR:vvi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100259851
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 100259851
NCBI-ProteinID: XP_002270699
UniProt: A5BW15 A0ABY9D2I9
LinkDB
Position
13:join(6313522..6313546,6314007..6314083,6315035..6315118,6315300..6315394,6315564..6315669,6318801..6318890,6318980..6319066,6319542..6319580)
AA seq 200 aa
MGCSSSLPDRNSGRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES
FNKAQYWVKELQKHGSPDIVMALVGNKADLHENREVPVQDGIDYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPSSS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctcccttccggatagaaattctggacggttgggtgggctgaatgcg
gagaatggtggagcacccgatgcaaaaaacctccgggttaagctggttttgttgggggat
tctggtgttggaaaaagctgtattgttcttcgttttgttcgtggccagtttgaccctaca
tccaaggtgactgtaggagcttcattcttgtcacaaacaattgccttgcaagattctacg
acagttaagtttgaaatatgggacactgctggtcaagagaggtatgctgcgctggcacca
ctttactatcgaggtgctgcagttgcagttgtagtgtatgatataacaagcccagaatca
ttcaacaaagcacagtattgggttaaggaattgcaaaaacatggaagccctgatattgtc
atggctttagttgggaacaaagctgatcttcatgagaatcgagaagtaccagttcaagat
ggtattgattatgcagagaagaatggtatgttctttattgaaacatctgcaaagacagct
gataacataaaccagctgtttgaggaaattgctaaaagattgccacgcccttcctcatcg
tga

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