Vitis vinifera (wine grape): 100260062
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Entry
100260062 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100260062
KO
K13130
gem associated protein 2
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100260062
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100260062
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Gene cluster
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
100260062
NCBI-ProteinID:
XP_002268864
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Position
5:complement(join(22587546..22588106,22589141..22589318,22606086..22606323,22609287..22610283))
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AA seq
657 aa
AA seq
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MIMDVDFDCVERRSSSTQQEEVAGIAEEKHFKEQQETEVDENFLELEESGKLKKISGNGN
GSKENHSAGVQVQDCTEGLPTSSSSVVVVDENQELGNASKIEEKCLLGSVDEAEETRLVK
SADSESFLVGSVNEAEQNHLVKSDDLESWNETVVKSFKTNSRHKSVEAGEKMVQNGDGGK
VKPLRGKLKIEVIDDTAVIDSTSIPRSGNGCSRQKSKQETDERRDKRTRRKAKGGKQGLE
ANGKGKIVAQIVEVQNNESGTKRVYSREEMEVLRYINSEEQRKMWMEIRCSLGPVVLKEY
DGLENCTNHKHIRVNFDPRQQSAKKEKAPAILREVSSSNVDDEMQNLHPLDPAYGHSVGG
KDSYADPEECSEDSDSDEDYGSIQRPAFLVEGEPDFDSGPPEDGLEYLRRVRWEAAQIPE
VTVAKLDMNKLNKEQTLYMPKIPDIAKCPEHLAPLKKWEDAFLADFAELRAALSHLEDSR
VENSDRQHPVFSFHEDYSCQVLESTLPENFDNLTIDSQPLDCSNPKNSDKRLPLSIINED
DTSLSPENSSPRTESSGNYPLLSVILGMDSVARVSMLRKCINSLETKSTLSRSDCMWLFA
LCAAIDTPLHADTCAALRSLLRKCASLRAEKSELDDEVVMLNILVTIAGRYFKQSEN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggatgtagattttgattgcgttgaacgccgctccagttcaacacaacaagaa
gaggttgcaggaattgcagaggaaaagcatttcaaagaacagcaagaaactgaggttgat
gaaaattttctcgaacttgaagaatctgggaaactcaagaaaatttctgggaatggaaat
ggaagtaaagaaaatcattcagctggtgttcaagttcaagattgcacagaaggcttgccc
acctcgtcttcttcggttgtagttgttgatgaaaatcaagaactgggaaacgcatcgaaa
attgaagagaaatgtttgcttgggtcagtggacgaagctgaagaaacccgtttggtgaaa
tcggctgattctgagagttttttggttgggtcagtgaatgaagctgaacaaaaccatttg
gtaaaatctgatgatttggagagttggaatgaaactgtggtcaaatctttcaagaccaat
agcagacataaaagtgtggaagctggtgaaaagatggtgcagaatggtgatggtggaaag
gtgaaacctctgagagggaagctgaagattgaggtgattgatgacactgcagtgattgat
tctacttcaatccccagaagtggaaatgggtgtagtagacagaaatcgaaacaagaaacg
gacgaaaggagggataaacggacccgaagaaaggcaaaaggcgggaagcagggtttggag
gcaaatgggaagggaaagattgtagcacagattgtagaagtgcaaaataatgagagtgga
acgaagagggtttactcgcgggaggagatggaggtactgaggtatatcaattctgaagaa
cagcgtaaaatgtggatggagattcgctgtagtctgggccctgtggtgctcaaggagtat
gatggcctggaaaactgcacaaatcacaagcacatccgtgttaactttgatcctcggcaa
cagtctgccaagaaggaaaaggcccctgcaattctcagggaagttagttcttcaaatgtg
gatgatgagatgcaaaacttgcatcctctggacccagcttatggtcacagtgttggtggc
aaagacagctatgctgatccagaagagtgcagtgaagatagtgacagtgatgaagattat
ggtagcatccagaggccagcctttttggtagaaggagaacctgattttgattctggtcct
ccagaagatggattagaatatcttaggcgtgtcaggtgggaagctgcacagattccagag
gtgacagtggcaaagcttgacatgaataaattgaacaaagaacagactctttatatgccc
aagattcctgatattgcaaagtgtccggaacacttagcaccattgaaaaagtgggaggat
gcattcttagctgattttgcagagctgagagcggctctgtcccatcttgaagattccaga
gttgaaaattctgatagacaacacccagtatttagttttcatgaagattattcatgtcag
gttttggagagcactttaccagaaaattttgataaccttacaattgattcacagccactt
gattgttctaaccccaaaaactctgataaacggctgcccttgtcaatcataaatgaagat
gatacctcattatctcctgagaattccagtccaagaacagaaagttctggtaactaccct
ttgttgtctgtgattctaggcatggactctgtagctagagtatcaatgctgaggaaatgc
ataaattcactggagacaaagagtaccttgtccaggagtgattgcatgtggctgtttgcc
ctctgtgcagcaattgatactccactgcatgctgacacatgtgctgctcttcggtctctg
ctcagaaagtgtgcaagcttgagggctgaaaaatctgaactagatgatgaggtggtaatg
ctgaacattctagtgacaattgcaggccggtattttaagcagtcggagaattga
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