Vitis vinifera (wine grape): 100260157
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Entry
100260157 CDS
T01084
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100260157
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100260157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
TFIIB
A2L_zn_ribbon
GDH_C
Trm112p
PRP21_like_P
AKAP28
Motif
Other DBs
NCBI-GeneID:
100260157
NCBI-ProteinID:
XP_002275055
UniProt:
D7UCC1
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All DBs
Position
15:22455251..22456858
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AA seq
535 aa
AA seq
DB search
MEASGSCKGCKKNSLIRDDVTGSLVCSSCGLIQPFDNYDPQLGGLNGPQGTFVRVGTAGT
GSSLNYKDKKIFEAQKLIDDLMFKLGFSSEKSNEVRTMVSTITEGEFGQGDWFPVLVGAC
SYVVRRRSNRALPIAEVGAVIGCDVYELGRMIGRVVEFLNLKLPELDIVNSLELAFRKCG
SLNRVSKDKVDQMLKQGKFLVQWAVKWFLTTGRRPLPMIAAVLMFVAELNQVDVRIENIA
NEIHAGVATSRLRYKELSEALVKVAQSLPWGSDVSTKNIVKNAPFVIQYMEMKLRSQLSG
KPRKGKKNLERIGFDLDSVVSECLKKEFDYVSEGYSIENGAAADDRNGLLLDIDDSDKLK
LSQESLSLMYFKFVNEGSRVNPMGDDGGDNRRRKRRREYDPPVIKNWWNGKSDKSKKLLL
KQILEKDVGLNALPPSFVSGCLAYERRREKINAAKLRIKKVMYPSNTSSDDTDDFSAKEQ
EHLHAEKKRRRAKADIDWEDFAIETLLLHHVKEDEIEKGHYNTLLDLHVFNSGNL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctcaggctcctgcaaaggttgtaaaaagaattctttgattcgggacgatgta
acgggctcgttggtgtgttcatcctgcggcctcatccaacctttcgacaactacgatccc
caattgggtggcctcaatggtccacagggcacattcgtccgcgtcggcaccgccggaacc
ggaagctccttgaactacaaggacaagaaaatcttcgaagcccagaaactcatcgatgac
ttgatgttcaagttagggttttcgagtgagaagtcaaatgaggtcaggacaatggtttcc
accattacagaaggagagttcggtcaaggcgattggttccctgtcctcgtcggcgcttgt
tcgtatgttgtaaggcggcggagcaatcgagcactaccgattgccgaagtgggggcggtg
attggttgcgatgtttatgagctagggcgaatgatcggccgcgttgttgaatttttgaat
ctgaaattgccggagcttgacattgtgaattccttggaattagcgtttcgaaaatgtggg
agtttgaatagggtttccaaggataaggtggatcaaatgcttaaacaaggcaaatttttg
gtgcaatgggcagtgaaatggtttttgacgacggggcggaggccactgccgatgattgca
gctgtgttaatgtttgttgcagaattgaatcaagtggatgttcggatcgagaatattgca
aatgaaattcatgccggagtggctacgagtaggttaaggtataaagagctttcagaggct
cttgtcaaagtagcccaatcattgccatgggggagtgatgtttccactaaaaatatagtc
aagaatgcaccttttgtgattcaatatatggagatgaagttgaggtcgcaattatccgga
aaacccagaaaagggaagaagaatttggagaggattggttttgatttggacagtgttgtt
agtgaatgtttgaagaaagaatttgactatgtatccgaaggttatagcattgagaatggt
gctgcagcagatgatagaaatgggttattgttagacattgatgactccgacaagctcaag
ctttcgcaagaatccttgtctttgatgtactttaagtttgtgaatgagggttctcgggtt
aaccctatgggagatgatggaggggataacagaagaagaaaaaggaggagagagtatgat
cctcctgtaattaagaattggtggaatggaaaatcggataagagtaaaaagcttttgctt
aagcaaatactggagaaagatgtaggattgaatgctttgcctccatcttttgtttccgga
tgcttagcctatgaacggaggagggaaaaaataaatgctgctaagttgcgcatcaagaag
gttatgtatccatcaaatactagctcagatgacacagatgatttttcggccaaggaacag
gaacatttacatgcggagaagaaacgaaggagagcaaaagctgatattgattgggaagat
tttgccattgaaaccctcctccttcatcatgttaaagaagatgaaattgagaaggggcac
tacaataccttattggatcttcatgttttcaactcagggaatttgtga
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