Vitis vinifera (wine grape): 100260239
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Entry
100260239 CDS
T01084
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100260239
03021 Transcription machinery [BR:
vvi03021
]
100260239
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100260239
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
100260239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
Zf-C2H2_ZNF451_1st
zf-met
Zap1_zf1
zf_Hakai
DapB_N
Motif
Other DBs
NCBI-GeneID:
100260239
NCBI-ProteinID:
XP_002278827
LinkDB
All DBs
Position
8:complement(join(12364148..12364333,12364462..12364605,12364702..12364937,12365071..12365356,12366029..12366163,12366597..12366722))
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AA seq
370 aa
AA seq
DB search
MGERGERKEPIFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNEEKEGEK
SNACEECGASFKKPAYLKQHMQSHSLERPFTCPVDDCQSSYRRKDHLTRHLLQHQGKLFT
CPVENCKRRFAFQGNMKRHIKEFHDEESPPNDVGSKQYVCPELGCGKVFKFASKLQKHED
SHAKLDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLRTHE
SVCSSERVKCHFKGCLHTFSTKSNLDQHVKAVHLKLRPFVCGIPGCGMRFPFKHVRDNHE
KTGCHVYTHGDFEELDEQFRLRPKGGRKRKSPPIEALLRKRVTPPSQSDSILCQGPEYLS
WLLSDAEDQQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaagaggagaaagaaaagagccgatattcagggacgtaaggcgttacttctgt
gattactgtggactttgcaggtccaagaaggctcttattagggcacacatgctctcccat
cacaaggaggagatggaagggcaaaaagttcataacaatgaggaaaaggagggagagaag
tccaatgcctgtgaagaatgtggtgcaagtttcaaaaaaccagcttacttgaagcaacac
atgcaaagtcattctcttgagaggccatttacttgtccagtagatgactgccagtctagc
tatagaagaaaagaccacttgacccgccaccttcttcagcaccaagggaaactcttcaca
tgccctgttgagaattgcaaacgtagatttgctttccaaggcaacatgaaaaggcacatt
aaggaatttcatgatgaggagtctccccctaatgatgttggttccaaacaatatgtatgc
cctgaacttgggtgtggaaaggtgttcaaatttgcttcaaagttgcagaagcatgaggat
tctcatgctaagctggactcagtggaggcagtctgtttagaaccagaatgtttgaaacac
ttcactaatgaacaatgcctcaaggctcatctccaatcctgccaccaacacattatctgt
gagatatgtggcaccaagcagctgaagaagaacatcaagaggcacctcaggacacatgag
tcagtatgttcctctgagagagtcaaatgtcactttaagggttgtcttcacacgttttca
actaaatcaaatcttgatcaacatgtgaaggctgtgcatcttaagctcagaccatttgtc
tgcggtattccgggttgtggcatgagattcccattcaagcatgtgagagataaccacgag
aaaactggatgccacgtttatacccatggggattttgaggagttggatgagcaattcagg
ctgaggccaaagggtggcaggaagaggaagtccccacctatagaagcactgctgcggaag
agggtgactccgccaagtcaatcagattctattttgtgtcaagggccggagtacctttct
tggctactctcagatgctgaggatcagcagtga
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integrated database retrieval system
