Vitis vinifera (wine grape): 100260296
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Entry
100260296 CDS
T01084
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2 isoform X1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100260296
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
100260296
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
100260296
NCBI-ProteinID:
XP_002271239
UniProt:
F6HCC4
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All DBs
Position
13:join(521507..522652,522741..522854,522935..522990,524233..524299,525253..525345,526428..526513,526638..526800,526941..527114,527382..527572,527734..527815,529266..529472,529999..530088,530169..530327)
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AA seq
875 aa
AA seq
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MASRTHQPPPLSLSSDSDTDSEGNSGGVETLRHGDLSDSIFKSYIQITGRSSPDLSKIQS
FLTSSRSGALSCLICLERIRPSDPTWSCTSGCFAVFHLICIQSWARQASDLSASRATARL
SADLFPAAAAKAIEDAAWHCPKCRFEYSKALIPKAYFCFCGKLQDPPRDPWILPHSCGEI
CNRPLKNNCGHYCLLLCHPGPCPSCPKLVQARCFCGSVEDVQRCGFKKFSCKNICSKLLD
CGIHRCSDTCHDGPCPPCQARSVYRCQCGEIEEERECCDRVFRCEVPCGRVLGCGKHACS
KGCHSGECGQCPLQGRRTCPCGKRVYEGMACDVSVPLCGATCDKMLSCGFHSCPERCHRG
QCIETCRTVVIKGCRCGSLKKEVPCYQDLACERKCQKVRDCGRHACKRRCCDGDCPPCSE
ICGKRLRCKNHKCPSPCHRGPCAPCPVMVTISCSCGETHFEVPCGTETEQKPPKCSKLCH
ITPLCKHGSDCKPHRCHYGACPPCRLLCEEEFPCGHKCKLRCHGPKPPPNPEFTLKPKKR
KSNHQAEGTPGSPCPPCSELLWRSCVGQHIGTERMMVCSDRKKFSCENLCGNLLPCGNHY
CTKTCHALMSQFLTSVQNQRGESCEDCHLPCEKERRPKCPHPCPSPCHPGECAPCKVLIK
RSCHCGSMVHVFECLYFNSLSEKEQMTIRSCGGPCHRKLPNCTHLCPETCHPGQCPSPDK
CSKKVTVRCGCQTLKKEWLCHDVQAAYLNVSCDPKDVSKNQFGLGLLPCNSECKSKVKVV
DSELQLRKPKVVERKEPHVEKHVPKRRKRRERVQEVQQISRLQKIISTTWRLLLYFTFLM
VLIAVTYYGYKGLLWLSDWMNEVEEKRERRRYPQI
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaggacccaccaaccaccgccactctctctctcgtcggattcagataccgat
tccgagggaaattccggcggagtagagactctccggcacggtgacctctcggactctatc
ttcaaatcctacattcagatcacaggtcgttcatcgcctgatctctcgaaaatccaatct
ttcctcacatcatcgcgctccggggctctgtcatgcctaatttgcctggagcggatccgg
ccgtctgatcccacctggtcttgcacctccggctgctttgccgtcttccacctcatctgc
atccaaagctgggcccgccaagcctccgacctctccgcttcacgcgccactgcacgcctg
tccgccgatctcttccccgccgcagcagcaaaggccattgaagacgccgcctggcactgc
cccaagtgccgattcgagtattctaaggccctaatccccaaagcttacttctgtttttgt
ggtaaattacaagacccaccgagggacccgtggatcttaccgcattcatgcggcgaaata
tgtaatcgcccactgaagaacaattgtggtcactattgtttgctgctctgccaccctggc
ccctgtccatcctgcccaaaacttgtacaagctcgttgtttttgtgggtctgtcgaagat
gttcagcgatgtgggttcaagaaattttcgtgtaagaatatttgttccaagttattggat
tgtgggattcaccggtgttcggatacttgtcatgatggcccttgccctccttgtcaagct
cgcagtgtttatcggtgtcaatgtggagagatagaagaagagagggagtgctgcgatcgg
gtctttcggtgtgaggtcccgtgtgggagagtgcttgggtgtgggaagcatgcgtgcagt
aaaggttgtcattcgggtgagtgtggccagtgcccacttcagggaaggaggacatgccct
tgtgggaagagggtgtatgaagggatggcttgtgatgtctcggtgccactctgtggagcc
acttgtgataagatgttgagctgcgggtttcatagttgcccggagcgatgccatagaggc
caatgcattgagacttgcaggactgttgtcattaaaggatgtcggtgtgggagcttgaag
aaagaggttccttgctatcaagatttggcatgtgaaaggaaatgtcagaaagtacgagat
tgcggacgccatgcttgtaaacgccgatgctgtgatggggattgcccaccatgctctgag
atttgtggcaagaggcttagatgtaagaaccacaagtgcccttctccatgccatagaggt
ccctgcgctccttgccctgtcatggtgacaatttcatgttcgtgtggtgagacacatttt
gaggttccttgtggtactgaaacagaacagaagcctccaaaatgttccaagttatgtcac
ataactcctttatgcaaacatggatcagattgtaagccacatcgatgccattatggagct
tgccccccatgtcgactgctatgtgaagaagaattcccatgtggccataagtgcaagctc
aggtgtcatggccctaaaccaccacctaatcctgaattcacattgaaacctaagaaaagg
aagtcaaatcatcaggctgaagggactcctggttcaccatgtcctccttgctcagaactc
ctttggaggtcttgtgttggccaacacattggcacagagagaatgatggtctgctcggat
agaaaaaaattttcttgtgaaaatttgtgtgggaatcttcttccttgtggcaatcactat
tgtactaaaacttgccatgccctgatgagccagtttttaacatcagttcagaatcaaaga
ggcgagtcctgcgaagattgccatctaccttgtgaaaaggagaggaggcccaaatgccca
catccttgtccatcaccatgtcatccaggagaatgtgccccttgcaaagtgcttataaaa
agatcatgtcattgtggttccatggtccatgtttttgagtgcttgtatttcaacagcttg
tcagaaaaggagcaaatgactattcggtcttgtggtggaccctgccatagaaagttaccc
aactgtacacatctctgcccagagacttgccatcctggtcaatgcccatcacctgataag
tgctctaaaaaggtaactgttcgctgtggatgtcagaccttgaaaaaggaatggctatgt
catgatgttcaagcagcctatctcaatgttagttgtgatccaaaagatgtatctaaaaat
caatttggacttggacttcttccttgcaattcagagtgtaagagtaaagtgaaggtggtt
gattcagaattacaattacgtaaaccaaaagttgtggagcggaaggagccacatgtcgaa
aagcatgtaccaaagcgtagaaaaagacgggaacgggtacaagaagtgcagcaaatctct
agactgcagaaaattatttccaccacatggaggcttcttctgtatttcacctttttgatg
gttctgatagcagtgacatattatggttacaagggtctcttgtggctctctgactggatg
aatgaagttgaagagaaaagagaaagaagaagatacccgcaaatctga
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