Vitis vinifera (wine grape): 100260451
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Entry
100260451 CDS
T01084
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00750
Vitamin B6 metabolism
vvi01100
Metabolic pathways
vvi01240
Biosynthesis of cofactors
Module
vvi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
100260451
Enzymes [BR:
vvi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
100260451
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
Motif
Other DBs
NCBI-GeneID:
100260451
NCBI-ProteinID:
XP_002278391
UniProt:
A0A438F9F7
A0ABY9C1X6
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Position
6:7380779..7381708
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AA seq
309 aa
AA seq
DB search
MAGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPSLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
EVLTVADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV
RSVMGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDK
VERYANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagtggagttgttacagtgtacggcaatggtgctattactgagaccaagaaa
tcacctttctctgtcaaggtgggtctggcccagatgctgcgcggcggcgttatcatggac
gttgtcaacgccgagcaagcgcgcatcgcggaggaggccggggcctgtgccgtcatggct
ctggagcgggttcccgccgacatccgcgcccaaggcggcgtcgctcggatgagcgacccg
agcctcatcaaggagatcaagcaggcggtgactattccggtgatggccaaggctcgtatc
ggtcatttcgtggaggctcagatcttggaggccatcggcatcgattatgttgatgagagc
gaggttctcactgtcgccgacgaggacaaccacatcaacaagcataatttcaggatcccc
ttcgtctgcggctgccggaacctcggggaagcccttcgccggattcgggagggcgcggcg
atgattcgtaccaagggggaggccgggacaggcaacatcgtggaagcggtaaggcacgtg
aggtcggtgatgggggagattagggtgctgaggaacatggatgacgatgaggtcttcacc
tacgccaagaagctttctgcgccctatgatttggtgatgcagacgaagcaattggggagg
ctgcccgtagtgcatttcgccgccggcggtgtcgctactccggctgacgccgcgctgatg
atgcagttgggttgtgatggagttttcgtgggttctggggtgttcaaaagcggcgacccc
gcccgacgagcgagggctattgtgcaggccgtgacgcattacagtgacccagatgtgctt
gcggaggtgagctgtggattgggtgaggcaatggtgggtatcaatctcaatgacgacaag
gttgaaaggtatgcgaatcggtcagagtaa
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