Vitis vinifera (wine grape): 100260463
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Entry
100260463 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100260463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100260463
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100260463
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100260463
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
100260463
NCBI-ProteinID:
XP_002271757
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Position
14:complement(join(18396198..18396884,18404265..18404645))
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AA seq
355 aa
AA seq
DB search
MAKLRFSEDECDDALPVKVVLARERRIAYRFRIGGAGQPGMSSDEEHDGSCSSEGSDDDT
DDSADVNVEIVDDEHGQEIVEAVRDPGQGTSSGSEANRDASVSVILTDPEVLDCSICLEP
LSVPVFQCENGHIACSSCCTKLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCK
ETVSYGKKHDHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVH
LEFNAVDKFCILEAKEGALFIVSSSIQQLGHAVTVCRIGPRSSRGHAFNLAAWKGDRSIM
LQSFTENIREVVELPSLSMGFLLIPNAFLGSSGQLKLELCIRGNNARPAKKIKLK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttaagattttcagaagacgaatgcgacgatgctttgccagtgaaggtggtg
ctcgcaagagaacggagaatagcctacagatttagaattggaggtgcagggcaaccgggg
atgtcctctgacgaagaacatgacggctcctgctcatctgaaggatcggatgatgatacg
gatgattccgcggacgtgaatgtggaaattgttgatgatgaacatggacaagaaatcgtg
gaggcagtgcgagacccaggtcagggaacaagttcgggaagcgaggctaatagagatgct
tcggtttctgtgatcctgactgacccggaagtgcttgattgctccatttgccttgaaccc
ttgagcgttcccgtatttcagtgtgagaatgggcatatagcatgctcttcctgctgcacc
aaactcagcaacagatgcccgtcctgctcctggcctattggctataaccgttgccgggct
attgaaaaggttcttgaatcagtcaaagtatcatgccaaaacacagcatatggctgcaaa
gaaacagtgagttacggtaagaaacatgaccacgaggtgacatgcaactacgtaccatgt
tcatgccctcattccaactgcaacttccggggatcatccaaacagctagctcaacacttc
agaagtaaacatctgaattcagtgatacgcttccagtacaacagcttcttccctgttcat
ttggaatttaatgcagtggacaagttctgcattctagaagcaaaagaaggtgccctattc
attgttagtagctctattcaacagcttgggcatgcagtcacagtttgtcgtattgggcct
agatcatctagagggcatgcattcaatcttgcagcatggaaaggggacaggtcgatcatg
ttacaatcattcacggagaatattagagaagttgttgaacttccttctctttcaatggga
tttcttctaattccaaacgcattcctgggttcttcaggacagttgaagttggagctgtgt
ataagggggaacaatgcacgtcctgcaaaaaaaataaagctgaagtag
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