KEGG   Vitis vinifera (wine grape): 100260468
Entry
100260468         CDS       T01084                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03030  DNA replication
vvi03410  Base excision repair
vvi03420  Nucleotide excision repair
vvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100260468
   03410 Base excision repair
    100260468
   03420 Nucleotide excision repair
    100260468
   03430 Mismatch repair
    100260468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100260468
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100260468
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100260468
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100260468
   MMR (mismatch excision repair)
    Other MMR factors
     100260468
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    100260468
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9
Other DBs
NCBI-GeneID: 100260468
NCBI-ProteinID: XP_002279946
LinkDB
Position
6:complement(join(6690110..6690337,6690416..6690513,6690581..6690727,6691280..6691598))
AA seq 263 aa
MFELRLVQGSLLKKVLEAIKDLVNDANFDCSATGFSLQAMDPSHVALVALLLRPDGFEHY
RCDRNISMGMNLNNMSKILKCGGNDDIITIRADDGSDTVTFMFESPNGSANFEMNLMDID
SEHHGIDESKCCAVVRMPSSEFQRICKVLSSIGDTVVISVTNEGVQFSTRGDIGTANIVC
RQNINVDKPEESTVIEMSQPVSSQFPLRYMNSFTKATPLSNTVTISLTSELLLAVEYTIA
EMGYIRFYLAPKIEDLAEALGLE
NT seq 792 nt   +upstreamnt  +downstreamnt
atgtttgagttgaggctggttcaggggagccttctgaagaaggttctagaggcgatcaag
gacctggtcaacgatgccaacttcgactgctctgccaccggattctctctccaggccatg
gatcccagccacgtggcccttgtggctctgctcctcagaccggatggcttcgagcactac
cgctgcgatcggaacatctctatgggcatgaacctcaataacatgtccaagattctgaag
tgcggcgggaatgatgacatcatcaccatcagggccgatgacggcagtgatactgtcacc
ttcatgtttgaaagccctaatgggagtgcaaattttgagatgaacctgatggacattgat
agtgagcaccatgggattgatgaatcaaaatgctgcgctgttgttcggatgccttcgtct
gagttccaaaggatttgtaaagttctcagtagcattggtgacacagttgtcatctctgtg
acaaacgagggtgtgcagttctcaacgcgaggtgatattggaactgcaaatattgtttgc
aggcagaatattaacgtggacaagccggaggaatcaacagtgatagagatgagtcaacca
gtttcatcgcaatttccactgagatacatgaactccttcacaaaagccaccccattatca
aacacggttacaatcagcttgacctcagagttgcttttggcggttgagtacacaattgca
gagatgggttatatcaggttctacttggcacccaagatagaagacttagccgaagcccta
ggtctagaatag

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