Vitis vinifera (wine grape): 100260481
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Entry
100260481 CDS
T01084
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03260
translation initiation factor 4G
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100260481
03012 Translation factors [BR:
vvi03012
]
100260481
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100260481
mRNA cycle factors
Stress granule specific factors
100260481
Translation factors [BR:
vvi03012
]
Eukaryotic type
Initiation factors
eIF-4
100260481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
100260481
NCBI-ProteinID:
XP_002277218
UniProt:
F6HYK5
A0ABY9CUZ7
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All DBs
Position
11:complement(join(8480858..8481916,8482007..8482249,8482355..8482705,8482815..8482902,8483793..8483887,8486513..8486704,8486916..8487011,8488403..8488474,8490024..8490212))
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AA seq
794 aa
AA seq
DB search
MQADQTVLSLRPGGGGGGGGGANRGSRFLGPRFDSSSSSPFGSSSDLPVLRPHGGAPSSF
SIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILKIKQEIEAELFGEDQNWGRGESNL
PNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISS
VLGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTA
DILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQE
AFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIV
QELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPR
LRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQ
GTMGPGGFPITRPGSGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQ
QTHVQSPLMGKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSP
VPAKSVPVASIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSP
AYHPEVVKEAISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGID
LPKAPNSFGEVIGNLVLAGALDFKVVTEIMKKVEDDRFQKMIFDAVMRIVSSSPSGQGVL
DSQAADIAACQSLL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgatcagacggtgttgagcttgagacctggtggtggcggcggcggcggcggc
ggagccaatcgaggaagcagattccttggtcctcggttcgattcgtcttcttcttcgcct
tttggttcatcttctgatcttcctgttctgcgtcctcatggcggtgctccttcctctttc
tctataaaggctggggatagtcggtttgagggtcgtgagcgtgtgcggttcacccgagac
aaactgttgcaacttagggaggttgttgatgtccctgaggatatattgaaaatcaaacaa
gagatagaagctgaattatttggtgaagatcaaaattggggtcggggagaaagcaatctg
ccaaatcaatctcagagtcgttattctgagccagataatcgtgactggcgtggccggtct
gcacagcttcctgcctctggagaggagaggtcatggtttgactctagacagcaggaagca
aaccaatttaatcgtcaagaccaactaaactcccagtttgcaaaggctcaaatatcttct
gtcctagggggacctgctcctgctctagtgaaggctgaggtgccatggtccgctcgacgt
gtgaatctttctgagaaggaacgtgtcttgaagacagtgaaagggatactgaacaagctc
actccagagaagtttgatcttctcaagggccaattgattgactctgggatcacaacagct
gatatcttgaagggagtcatctcgctgatatttgataaggcagtgctagaacccactttt
tgtcccatgtatgccctcctgtgctctgatcttaatgaaaagcttcccccattcccatct
gatgaacctggtggaaaagaaatcacttttaagcgagttctcttgaataactgccaggag
gcatttgaaggttctgataaactgagagcagaaataaggcagatgactgcccctgaacaa
gagttggagcgaagagacaaggaaagaatggttaagcttcgaactttgggaaacatccgt
cttattggggagcttctgaaacagaaaatggtacctgaaaagattgtccaccacattgtt
caggagcttttaggacatgataataaatcttgtcctgatgaagagaatgttgaggccata
tgccagttctttaacactataggtaagcagcttgatgaaagtacaaaatctaggcgcata
aatgatatgtactttagccgattgaaggaattaacgacaaacccccaattggctccacgt
ctgaggttcatggttcgtgatgttcttgatctgcgtgcaaacagttgggttcccaggcgg
gaagaggtgaaagctaaaaccataacagaaatccatacagaggcagaaaaaaatcttggg
ttgcgtccaggtgccactgcaagcattagaaatagtcgcaacattgtttctggtgctcaa
gggaccatgggccctggtggcttcccaatcacccggcctggctctggggggatgatgcct
ggaatgccaggaaccaggaagatgcctggtatgcctggaattgataacgacaattgggag
gttccaaggacccgagccatgcctagaggtgatggatcaggtgttcagactcgtgtccag
cagacccatgtccagtcgccattgatgggcaagtcaatgccactgaactcaagactgtta
cctcagggcagtgctggttttataagtggtaggacaagtgccctattgcagggtagtggt
ccccctcctgcccgcactgccaactttggcttgggtatggaacctgcactccaaagccct
gtgcctgctaaatctgttcctgttgcatctattgttccagcagctgagaaaccagtgact
cctgctgccagattgaattcagatgacctccggagaaaaacagtctcacttcttgaggag
tactttggtgttcggattttagatgaagcactacagtgcgtggaggaactaaagtcccca
gcttaccatcccgaagttgtgaaggaggctatttcccttgcactagaaaagagcccacct
tgtgttgaccctgttgcgaaactcctggagttcttgttttccaagaaggttcttaccact
atggatatagggactggatgtttgatgtacggatcaatgctggatgatattggcattgat
ttaccaaaagcgccgaatagctttggtgaggttattgggaacctagttttggctggggca
ttggacttcaaggtagtgacggaaatcatgaagaaagtggaggatgacaggtttcagaaa
atgatatttgatgctgtgatgaggattgtcagttccagtccttctgggcaaggggtgttg
gattcgcaggcagccgacattgcagcttgccagagcctgctctag
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