Vitis vinifera (wine grape): 100260538
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Entry
100260538 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100260538
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
100260538
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
100260538
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
100260538
NCBI-ProteinID:
XP_019078136
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All DBs
Position
10:join(996464..996502,996584..996705,996876..996926,997017..997136,997223..997342,997419..997560,997647..997817,997904..998059,998292..998398,998584..998674,998759..998900,998979..999135,999238..999354,999493..999616,999790..1000029)
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AA seq
632 aa
AA seq
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MAKILSLSSQGSYVMLDNGLVKLTILRPQGFLTGIKYGGMDNLLDLKSSETNRGYWDINW
SLPGGQDRYQLIKGDDYSVVHSSNESIEVSFRSTYDPSTSGIRLPLSIDLRYILRAGVSG
FYCYAIYELPPGCRAFDVAQTRMVFKLRQERFHYMAISDEKQRVMPMPEDLLQNRGKKLI
VPESVLLVNPINPHLKGEVDDKYQYSMDNKDGGVHGWISSKPVVGFWVIFPSHEFRNGGP
TKQNLTVHTGPACLAMFHGTHYIGEDIMAHFKDGETWRKVFGPFFVYLNSTPNISNAHNL
WLDAKKQRLLEEAAWPYDFVSSPYYFTAKERGSVSGRLLVQDRFVSSSLVPAKYGYVGLS
VATTEGSWQTESKGYQFWVQTDLNGNFTIKNVIPGAYGLHGWVPGFIGDYLDNARITVSS
GSQKQLGNLTYVPIRDGPTVWEIGFPDRTTIGFYVPDVNPMYANKLFLNSPEKFRQYGLW
DRYTDLNPKSDQVFTIGVSDPKKDWFFAHVDRRGEANKYLPTQWEIKFNLDSVTSGIYKL
RLAMASATRADLKVHINDMDVKHLVFQVQNLGMDNTVCRHGIHGLYRLYSIDISSSLLVK
GDNSLFLTQARGGDAICGVLYDYLRLEAPASS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcctgagcttaagctcccaaggctcctatgtcatgctggacaatgggttg
gtgaaactcacaatactgaggccacaagggttcttgactggcatcaagtatggaggaatg
gacaatcttttagacctcaagtcaagtgaaactaacagagggtattgggacatcaactgg
agcttgcctggaggccaggacagataccaattaatcaaaggggatgattatagtgttgtt
cattccagtaatgagagtatagaggtttcattcaggagtacttatgatccatccacttca
ggcatcagactgccactcagtattgacttgaggtatatattgagggctggtgtttcaggc
ttctactgctatgcaatatatgagttacccccaggatgccgcgcttttgacgttgctcag
acaaggatggtgttcaagttgagacaagaaaggttccactacatggccatctcagatgag
aagcagagggtaatgcccatgccagaggatcttcttcagaacagaggcaaaaagctgatt
gtacctgaatcagttctgcttgtgaaccccattaatccccatctcaaaggcgaggttgat
gataagtaccagtactccatggacaacaaggatggaggagtccatggctggataagttct
aagcctgttgttggattctgggtcatcttccccagccatgagtttcgtaacggggggcct
accaagcaaaacctcactgtccacactggtcctgcttgccttgctatgttccatggaact
cattacattggagaggatataatggctcatttcaaagacggggagacatggaggaaggtc
tttggccccttcttcgtataccttaattctaccccaaatatatcaaatgcacacaactta
tggctagatgctaagaaacagaggctgttggaggaggcagcatggccgtatgattttgtc
tcatcaccctattactttactgctaaagaacgcggttcagtttcagggagactgctggtc
caagacaggtttgtttctagttctcttgtccctgctaagtatggatatgttggtctatca
gttgcaacaactgaaggatcctggcaaacagaaagcaagggttatcaattctgggtgcaa
accgatttgaatggaaacttcaccatcaagaatgttatcccaggagcttatggacttcat
ggctgggttcctggtttcattggtgattaccttgataatgcacgcattaccgtctcctca
gggtcacagaaacaacttggcaatttgacctatgttcccatcagagatggtccaactgta
tgggagatcggattcccagatcgcacaactattggtttctatgttcctgatgtgaatcca
atgtatgccaacaagttatttctgaacagccctgagaagttcaggcagtatggcttgtgg
gacagatacactgatctaaaccccaaatctgatcaagttttcacaataggcgtcagtgat
ccaaagaaagactggttctttgctcatgtagacaggagaggagaagctaataagtatctt
ccaacacaatgggaaatcaagtttaatcttgattcagtaaccagtgggatttacaagctg
aggttggccatggcatcagcaacccgcgctgatcttaaggtccacatcaatgacatggat
gtgaagcatctagtgttccaggtgcagaacttaggaatggacaacacagtttgtcgacat
ggaattcatggactgtaccggctttacagcattgatatttcttcgtctttgttggttaag
ggggacaactccttatttctcacacaggccaggggaggagatgcaatttgtggagtcctc
tatgattatcttaggctagaagctcctgcaagttcatag
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