Entry |
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Name |
(RefSeq) DIS3-like exonuclease 2
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KO |
K18758 | DIS3-like exonuclease 2 [EC:3.1.13.-] |
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Organism |
vvi Vitis vinifera (wine grape)
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Brite |
KEGG Orthology (KO) [BR:vvi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:vvi03019]
100260740
Messenger RNA biogenesis [BR:vvi03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100260740
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
18:complement(join(3302668..3303102,3303237..3303308,3303419..3305644,3308591..3308659,3308771..3308824,3308970..3309400,3310719..3310827))
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AA seq |
1131 aa
MRGVVEQSVVERCEDGDKEKKKRRRPRRSKQNASASATCSSANEMRGEVSECLANGSISN
YDTTSMSYSSSKQGGLETDPLDNHGLHKASDVAFTSLPTMHLNEQALHAEVGSMNNQHIF
PSDPSGGMCSKSCPVPIDCEQSIQSFTNKNVLSPYQDEGCAQRKYFTPHWSTEVVNEALE
KGNVFRASFRVNAYNRLEAYCTIEGVKTDVLISGLASQNRAVEGDIVAVKVDPFSLWSRM
KGSTVFPNNAGLTEDHNLLSDVTFVGDSWKGKGKVDVNCDFGHERNHFLLHDKGFPYEDN
AFSAENISQEPMGHNHVNGHHPPVFGPSHVSCFGERSNMDSLEKICAAINSFPSKRPTGS
VVAIIERSPRRVAVVGFLSVKQWLSSRVLHRKGTKMNKTYLSLSDSEYIQLTPTDPKFPK
MVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWGEESSLPLAHVMHIFGRGGEIEPRI
AAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIERRRDLRNLCIFTIDPSTATDLDDAL
SVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVYLLQHKLPMLPPLLSENLGS
LIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYEHAQGIIDGMFDVEGSKILG
NDCPQLHGHFKLPEVIRSIKYLYAISKTLRANRFNDGALLLDGAKVILLFDEHGVPYDST
FSVRKDSNSLVEEFMLLANKTAAEIISRAFPDNALLRRHPEPNLRKLREFEAFCSKHGLE
LDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLATYFCSGDLKDNKNEWSHYA
LAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMRRCFTGIHF
DKNAAESVEGQKALSVAASKHRLPCTEILADVVAYCNERKLASRHAKDGCERLYMWVLLK
KKEVLLSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLTVEWLDATSTLVVNLSTNKC
SRWRGNQGKYRQLEDVAWVIRPCNLKQEVDAFGDTVNEWGATTVGRDASVASLRPRCMSE
SGVPDANEIDPLFFPLTVRTLSTIPVVLHAVGGDDGPLDIGARLYMNSYYG |
NT seq |
3396 nt +upstreamnt +downstreamnt
atgagaggagtggttgagcaatctgttgttgagaggtgtgaagacggggataaggagaag
aagaaaaggcgtcgacctcggcgctctaaacagaacgcttctgcttcagcaacatgtagt
tcagcaaatgaaatgcgtggggaagtatcagaatgcttggcaaatggtagcatatcaaat
tatgataccacatcaatgagttattcctcatcaaagcagggtgggttggagactgatcct
ttagacaaccatggcttgcacaaagcatctgatgtcgctttcacttctctgccaacaatg
catttgaatgaacaagcactccacgcggaggttggaagcatgaacaatcagcatatattt
ccttctgatcctagtggaggaatgtgttctaaatcttgtcctgtgcccatcgattgtgaa
cagtcaattcagtcatttacaaacaaaaatgtcctttctccctatcaggatgagggttgt
gctcagagaaaatattttactccacactggtctactgaggttgttaacgaggctttagag
aaaggcaatgtcttcagagcatcgtttcgtgtgaatgcatacaatagactcgaggcctac
tgcacaatagagggagtgaaaacagatgttctcattagtggacttgcttctcagaataga
gctgtagaaggagacattgtagcagttaaagttgatcctttctcattatggagccggatg
aaagggtcaactgtgtttcctaacaatgctggtctaacagaagatcataacttgctttct
gatgttacttttgttggtgatagctggaaaggaaaaggcaaggtagatgtgaattgtgat
tttggccatgaaagaaatcacttccttcttcatgacaaggggtttccctacgaagataat
gctttttcagcggagaatatttcccaagaaccaatgggccataatcatgttaatggacat
cacccccctgtctttggtccttcacatgtaagttgttttggtgagcgaagcaacatggac
tcattggagaagatttgtgctgcaattaattcattcccatcaaaacgaccaactggcagt
gttgtagccatcattgagaggtctcctcgtcgggttgctgttgttggttttcttagtgtt
aagcagtggctttctagccgtgtacttcacagaaagggcactaaaatgaacaaaacttat
ttgtcactgtctgatagtgagtacatccagttgacaccaactgaccctaaatttccaaag
atggtggtacctgtgaaaggcttgtctgactgcatcaagaaacgattggaagatggtgat
gcatcaatggaaatggagcttgtagccgcacaaatcagtgattggggggaggaaagttct
cttcccctagctcatgtcatgcatatttttgggcgaggtggggaaatagaaccaagaatt
gctgcaattttattcgaaaatgcaattcgtccttctgaattttcccctgaatctctttcc
tgccttccacatattccttggaaggtgccacaggaggaaattgagagaagaagagatctt
agaaatttgtgcatatttactattgatccttctactgccactgatcttgatgatgctcta
tcagttgaaaagttatctggtggcaatttcagagtgggggtccatattgctgatgcatca
tattttgttctacccgacggagtcttagacagagaagcacaatctcgatctacaagtgtc
tatttgctgcagcataagttgccaatgttgccaccattgctttctgagaatttgggttca
cttattcctggagtggatagacttgccttttccattttctgggatattaatcttgctggg
gatgttgtagatcgttggattggccgtactgtgatacaatcttgttgcaagctttcatat
gaacatgcacagggcattattgatggaatgtttgatgtggagggttctaaaattctggga
aatgactgtccccaattgcatggccattttaaattgcctgaagtgataagatctattaaa
tatctttatgcaatttccaaaactttgagggccaacaggtttaatgatggcgcgctattg
ctggatggcgccaaagttattctcttgtttgatgaacatggagttccatatgacagcaca
ttttctgtacggaaggactccaattctcttgttgaggagtttatgcttttggccaacaag
acagctgcagaaatcatatctagagcttttcctgataatgcattattgagaaggcaccct
gagcctaatttgcgaaagcttagggagtttgaagcattttgtagtaagcatggtttagaa
ttggacacctcttcttctggtcagttcaatcattcgctggagcaaattagggaaaagctc
aaaaatgactctgtgttgtttgatattctcctttcatatgcttcgaggccaatgcaattg
gcaacatacttttgcagtggtgacttaaaagacaacaaaaacgagtggtctcattatgcc
ctggctgttcctctttacacccattttacatccccactgcgtcgatatcctgatatcata
gtacatcggacattggctgcagctatagaagctgaggaattatatctgaagcatggggca
aaaatacaaaaggtgaagaatggggaggaaatgagaagatgtttcactggtattcacttt
gataagaatgctgcagaatctgtagaaggtcagaaggcactatcagttgcagcatcaaag
caccggcttccatgcacagaaatacttgcagatgttgttgcttattgcaatgagagaaag
ctggctagtaggcatgctaaggatggctgtgagagactctatatgtgggttctgctgaag
aagaaagaggttttattgtcggaagctagagttttgggtctgggtccaagattcatgtcc
atttatattcataagcttggtattgagcgacgcatttactatgatgaagtcgaaggcttg
acagtagaatggcttgatgctacatccacattggtagtcaatttatccacaaataaatgt
tctcgttggagggggaatcaaggtaagtacaggcaacttgaagatgttgcatgggttatt
cgtccatgcaacttgaagcaggaggtggatgcgtttggagacactgttaatgagtggggt
gcaacaacagtgggaagagatgctagtgttgcatccttgcgcccaaggtgcatgtctgaa
tctggtgttccagatgctaatgaaattgaccctttattttttcctctcacagttcgcacc
ctttcaacaattccagtagttcttcatgctgttggcggtgatgatggacctcttgatata
ggggcaaggctgtacatgaactcatattatggttga |