KEGG   Vitis vinifera (wine grape): 100260824
Entry
100260824         CDS       T01084                                 
Name
(RefSeq) protein VACUOLELESS1
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100260824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100260824
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    100260824
   Hops complex
    100260824
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st Mcl1_mid Htt_bridge
Other DBs
NCBI-GeneID: 100260824
NCBI-ProteinID: XP_002283428
UniProt: E0CU27
LinkDB
Position
12:join(1178098..1178874,1180451..1180741,1181438..1181577,1184707..1184812,1184994..1185086,1186476..1186565,1186670..1186783,1186970..1187077,1187225..1187298,1187435..1187489,1189865..1190046,1190467..1190596,1190805..1190907,1191603..1191700,1192028..1192183)
AA seq 838 aa
MANVSVAAEWQLLYNRYYRKPEIYPMQWKHIDLSRNKVAGAPFGGPIAVIRDDSKIVQLY
AESALRKLRIFNSAGVQISETVWKHPGGRLVGMAWTDDQTLICVVQDGTVFRYNVHAELQ
EPNISMGKECFEQNVVECVFWGNGMVCITEANQIFCISDFKNPNPCKLADPNLDEYPLCV
AVIEPQYTMSGNVEVLLAVDDLVLLVEEDGVQQLGAGIGPLQKMVVSRNGKLLASFTHDG
RLLVISTDFSKIIFEYSCESALPPDQLSWCGMDSVLLYWDDMLLMVGPYGDPVRYLYDEP
IILIPECDGVRILSNTSMEFLQRVPDSTVSIFKIGSTLPAALLYDALDHFDRRSAKADEN
LRLIRSSLPEAVEACIDAAGHEFDVSRQRTLLRAASYGQAFCSHVQRDRFQVMCKTLRVL
NAVHNSEIGIPLSIQQYKLLTAPVLIGRLINMHQHLLALRISEYLGMNQEVVIMHWACSK
ITASLAIPDATLLEILLDKLRLCKGISFAAVAAHADKNGRRKLAAMLVEHESRSSKQVPL
LLSIGEEDTALTKATESGDTDLVYLVLFHIWQKRPALEYFGMIQARPLARDLFITYARCY
KHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKIIEKAQSLFSETK
EHTFESKAAEEHAKLIRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFK
VSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIDADEKGEALKYIPKLT
DPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLGVA
NT seq 2517 nt   +upstreamnt  +downstreamnt
atggcgaacgtctcggtggctgcagaatggcagctactctacaacaggtactaccggaag
ccggaaatctacccaatgcagtggaagcacatcgacctcagtcgaaacaaggttgccggt
gcccccttcggcggcccaattgccgtcatccgtgacgactccaagatcgtccagctctac
gccgaatccgccctccgaaaactccgaatcttcaactccgccggcgtccaaatctccgaa
accgtctggaaacaccctggcggccgcctcgtcggcatggcgtggactgacgatcaaact
ctcatctgcgtagttcaagacggcaccgtttttaggtacaatgttcatgctgagctccaa
gagccgaacatttcaatgggcaaggagtgttttgagcaaaatgtggttgagtgtgtgttt
tggggcaatggaatggtctgtataactgaggccaatcaaattttctgtatatcggatttc
aagaatccaaatccgtgtaagcttgctgacccaaatttggatgagtatccgctttgtgta
gcggtgatcgagccgcagtacacaatgtcgggcaatgtggaagtgcttcttgcggtggat
gatcttgtcttgcttgttgaggaggatggtgttcagcagttgggagctggaattgggccg
ctgcagaaaatggtggtgtcgcggaatgggaagttgctggcatcatttacacatgatgga
cggcttttagttatatccacagatttttcgaagatcatttttgagtacagttgtgagtca
gctcttcctcctgaccagctatcttggtgtggaatggatagtgtgctactttattgggat
gatatgcttttgatggtgggtccttatggggatccagtgcgctatctttatgatgaaccg
ataattcttatcccagagtgtgatggagtgagaatactttcaaatacaagcatggaattt
ctgcaacgagttcctgattccaccgtgtccatctttaagattggaagcacgctacctgca
gccttattgtatgatgccttggatcattttgatcggcgtagtgccaaggcggatgaaaat
ttgagattgattcgctcatccttgcctgaggctgttgaagcatgtattgatgctgctggt
catgaatttgatgtttcacggcaacgtacactactaagagctgcgagctatggccaagcc
ttttgcagccatgttcaacgtgatcgttttcaagtgatgtgtaagactctacgggtcttg
aatgctgtccacaacagtgagattgggatccctcttagtattcagcaatacaagttgctt
acagcaccagttctgattggtcgattgattaatatgcatcaacaccttcttgcattacgg
atatcagaatatcttggcatgaaccaagaggtggtgataatgcattgggcatgttcaaag
ataacggcgtcattagcaattcctgatgccactctccttgaaatcttacttgataagctc
agattatgcaaaggcatatcttttgcagctgttgctgctcatgcagataaaaatggccgt
cggaaactagctgctatgcttgttgaacatgaatcacgttcttccaagcaggttcctctc
ttgttaagcataggggaggaagatacagctctgactaaggcaactgaaagtggtgatact
gaccttgtttatctagttctctttcatatttggcagaagaggcctgcactggagtatttt
ggaatgatacaggccagacccctggcacgcgatttgttcataacttatgcaaggtgttat
aagcatgaattcctaaaggacttctttctatctactgggcagcttcaagatgttgctttt
ctgttatggaaagagtcgtgggaactaggaaagaatccaatggcaagcaaaggatctcca
cttcatggtccacggatcaagataattgaaaaggcccaaagtcttttctcagaaaccaaa
gaacatacctttgagtcaaaggctgctgaagagcatgctaaattgataagaattcaacat
gagttagaagtgactactaagcaggccatttttgttgattcaagtatcagtgatacgatt
cgcacatgtattgtactgggaaatcatcgtgctgcaatgaaggttaaaacagaattcaag
gtttctgaaaagagatggtactggcttaaagtttttgctttggctacaatcagagattgg
gatgccctagaaaagttctcaaaggagaagagaccaccaattggttatcggccttttgtg
gaggcttgcattgatgcagatgagaaaggtgaagcactaaaatatattcccaaacttaca
gatccacgggaaagagctgagtcttatgctcggattggcatggccaaggaagctgcagat
gctgcttctcaggcaaaggatggtgaattgcttggtcgattgaagttgacttttgcacaa
aatgctgcagcttcatcaatatttgatactcttcgggacagattaggagtcgcttaa

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