KEGG   Vitis vinifera (wine grape): 100260983
Entry
100260983         CDS       T01084                                 
Symbol
MSH7
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X2
  KO
K08737  DNA mismatch repair protein MSH6
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100260983 (MSH7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100260983 (MSH7)
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     100260983 (MSH7)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29
Other DBs
NCBI-GeneID: 100260983
NCBI-ProteinID: XP_010656338
UniProt: A0ABY9CU38
LinkDB
Position
11:join(3324710..3325065,3326147..3326633,3330033..3330128,3330245..3330300,3330628..3330694,3332338..3332433,3334138..3334269,3334371..3334404,3334492..3334539,3336710..3336909,3337019..3337145,3337252..3337529,3338250..3338444,3339197..3339610,3339744..3339840,3340034..3340161,3340396..3340902)
AA seq 1105 aa
MQRQKSILSFFQKPSPEDQKCGGSSAADTSAGRSVSQFPAKQRNQNFAVGDQPTFQIPKH
SSMEITGTDTPPEKVPRQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCESD
CEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIGPETPGMRPFVPRLKRIQ
EDNFENKNECSLLDSSKRLKLLQNSTTGNKNYGEVSDTTSKFEWLDPSRKRDANRRRPGD
ALYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELD
WKMTFSGVGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKL
VHVVTPSTACDGNIGPDAVHLLSVKEGNNILENGSVIYGFAFVDCAALKFWIGSISDDAS
CAALGALLMQVSPKEVIYENQELSKEAQKALKKYSLSGFTALKLTPLPLCTDFVDASKVR
NLIHLKGYFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVY
SGCLRMDGQTLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGIN
NRLNVVEHLMTNTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRV
KVFGLLVKGLRVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDF
PNYENHDVTDSDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRP
VILPHSEPATLSGETRGPLLKIRGLWHPFAIGENGGLPVPNDIHLGEDTDGNHPRTLLLT
GPNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIE
CTETASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLT
KEFASHPHVTLQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKE
VVEAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLF
CLWHEMKSSCQSTNSRKALNSQIAP
NT seq 3318 nt   +upstreamnt  +downstreamnt
atgcaacgtcagaaatctatattatctttttttcaaaaaccctcgccggaggaccaaaag
tgcggaggttcatcagccgccgacacatccgcgggccggagcgtttctcagtttccggcg
aagcaacggaaccaaaacttcgctgttggtgatcaacctacatttcagatcccaaagcac
tcgtctatggaaatcacaggtacggacactccgccggagaaggtgccacgtcagatgata
ccggccagcttcaccgcaaatgacgacagaaaagctgcttcttcttcttcttctttgttc
tcaagtatcatgcataagtttgtgaaagttgatgaaagagaaagctcttgcgagagtgac
tgtgaagtgctccctaaagaaggaaatgtgtttcacagtgatgcaaaggaaagtggtttt
aattctaccaagcaagttaatcaagtgtgttcacttcatagtgaaagtggtgatgatgat
atcattgggcctgagacacctggtatgcgaccttttgtcccccgtttgaaacgaattcaa
gaagataactttgagaataagaatgagtgttccttgctggattctagcaaaagactgaag
cttcttcagaattcaacaactggaaacaaaaactatggggaagtatctgatacaactagc
aagtttgaatggcttgatccttcccgaaaaagggatgctaataggaggaggcctggtgat
gctctttatgataaaaggacactttatataccgcctgatgctttgcagaaaatgtcagca
agtcagaaacaatattggagtatcaaatgccaatatatggatgttgttctcttcttcaaa
gtgggaaaattctatgagctttatgaactagatgctgaaattggccataaggagcttgat
tggaaaatgacatttagtggtgtggggaaatgtcgacaggttggtatttctgagagtggg
attgatgaggctgtgcagaagttgattgctcgtggatataaagttggacgaatggagcag
ttggagacatctgaacaagcaaaagccagaggttcaacttcagtaattcaaagaaaacta
gttcatgtagtcacaccatcaactgcatgcgatggcaacattgggcctgatgctgttcat
cttctttctgtaaaggagggtaacaacatattggagaatggttcagttatatatgggttt
gcttttgttgattgtgcggccttaaaattttggattggatccataagtgacgatgcttct
tgtgctgctttgggggctttgttgatgcaagtgtcacctaaggaagtcatatatgaaaac
caagagctgtccaaagaagctcagaaagcactcaagaagtattcattatcaggcttcact
gctttgaagttgactcctcttccgctgtgcactgattttgtggatgcttcaaaagtaaga
aatctgattcatttgaaggggtactttaaaggctctgataattcatgggatcatgcactt
gatggtgtcatgcaccatgatcttgctttatgcgctcttggtggacttcttggtcatttg
tccaggttgaagttggatgatactttacgtaatggagatattttaccataccaagtctat
agcggttgcctccggatggatggacaaacactagtcaatcttgagattttcagtaataat
gctgatggtggctcatcaggtactctatacaaatatcttgataactgtgtaacatcatct
ggtaagcggcttttgcggaactggatctgtcatccactgaaagatgttcagggaatcaat
aataggcttaatgtagtggagcatctaatgaccaatacagaaactatgtcgttcattgct
caatgtcttcgcaagcttccagacttggaaaggttacttggacaggtcaaggctagtgtt
cagtcatcagctttactattgctgcctttttttggcaaaaaattattgaaacagcgggta
aaagtgtttgggttgcttgttaaaggtttgcgcgttgcaatagacttgctagtgcagcta
cagaaggaagggcacataatgccatcattatcagaagtcttaaaacttccaatgttaagt
ggtagtagtggggttgataaactccttactcagttcgaagcagcaatagatagtgacttc
cccaattatgagaaccatgatgtaacagattcagatgccgaaatactctctattctgatt
gagttatttattgagaaaactactcagtggcttcaagtcattcatgctattaaccacatc
gatgtactaaggtcttttgcagtcattgcaaacttttcatgtggggctatgtctagacct
gttattttgcctcattcagaaccagcaactttgtctggagagactagaggacctctactt
aaaatcagaggtctatggcatccatttgctattggggagaatggaggactgcctgtccca
aatgacatacaccttggtgaggatacagatggcaatcatccacgcactttgctgttgact
ggaccaaatatgggtggaaaatcaacccttctgcgtgccacctgtcttgctgttatactg
gcccagctgggctcttatgtgccttgtaagatgtgtatactctcccttgtggatgttgtc
ttcacaaggcttggtgccactgatcgaatcatgactggagagagtactttctttatcgag
tgcactgaaacagcatcagttcttcgaaatgccactcaagattctcttgttctgcttgat
gaactgggtcgaggaacaagcacctttgatggatatgccattgcatatgctgtattccgc
catcttgttgaaaaggtcaactgccggttgctatttgctacacactaccacccactgaca
aaggaatttgcttctcatcctcatgtcacactacaacacatggcttgcactttcaacctg
aagggtgaaaagtcttctggaggtgaacaggagttagtttttctttaccagcttacatcc
ggagcatgcccagagagttatggattacaagtggcactcatggctggggtcccaaaagag
gtggttgaagcagcttcaacagctggacgaatgatgaaacagtcgatcggagaaagtttc
aggacaagtgaacagagatcagagttctcaactctccatgaagagtggctgaaggcccta
ttgaccgtttcaaggcttggagaacataattttgatgatgatgcctgggatacattgttt
tgcctgtggcatgagatgaagagctcatgccaatccactaactcaagaaaggcactaaat
tcacagattgcaccttag

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