Vitis vinifera (wine grape): 100261190
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Entry
100261190 CDS
T01084
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
100261190
Enzymes [BR:
vvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
100261190
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Other ribosome biogenesis factors
100261190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
FtsJ
Ubie_methyltran
Methyltransf_31
PCMT
Methyltransf_4
RsmF-B_ferredox
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
100261190
NCBI-ProteinID:
XP_002279425
UniProt:
F6H3P9
A0ABY9BPX8
LinkDB
All DBs
Position
4:join(1220294..1220534,1220693..1220751,1221007..1221057,1221808..1221943,1222452..1222537,1223006..1223104,1223251..1223304,1223823..1223967,1224275..1224336,1224479..1224566,1225027..1225110,1225755..1225916,1226014..1226273)
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AA seq
508 aa
AA seq
DB search
MVSSKTAATTASRAKKPKEQRLSKADRSSYFARREAAKVLQCVLQGDAKRRAVGSIKSLV
YSPSVRNKKATFALVCQTLKHLSIIKDVLDSARILNAKWKRQEGLMYIITYDILFGQEIS
SVGDAEKFLLLQKDAIQLALARLLVRKKVKRVEDLMALYQIPDVSKPRFVRVNTLKLDVE
SAFHELGKQNMVQKDDMVPDLLILPPGSDLHNHPLVRNGSVFMQGKASSMVAVALGPEPG
WEVLDACSAPGNKTVHLAALMNGKGKIIACELDNERVKRLEDTVRLSGAANIEVLHGDFL
NLNPMDPSYSKVRAILLDPSCSGSGTTAERLDHLLPSYAAGDATDVAGTERLNKLAAFQK
KALEHALSFPAVEKVVYSTCSIHQIENEDVIKSVLPLAASHGFQLATPFPQWPRRGLPVF
EGSEHLLRTHPVEDKEGFFIALFVRKSIARSLEQPIKTRKNNKVKSAKRNATMNHNKSVM
PFPFTRLSKLLLHSHLRLQTYKKLNLST
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcttcgaaaacggcggcgacgacagcctcacgcgccaagaagccgaaggagcag
cggctaagcaaagccgaccggtcttcatacttcgctagaagggaagccgcgaaggtcctg
cagtgcgttctccaaggagacgctaagcggcgagccgtcggctccatcaaatcgctggtc
tatagcccctcggtgaggaacaagaaggccaccttcgcgctcgtctgtcaaactctgaag
catctttcaattatcaaggatgttttggactctgctaggattctaaatgccaagtggaag
aggcaagagggattgatgtatataatcacttacgatattctatttgggcaggaaatttca
tcagttggtgatgcagagaaatttctactgcttcagaaagatgctatacagttagctcta
gcacggcttttggtgcgaaagaaggtgaaacgtgttgaagacttgatggctctttatcaa
attcctgatgtttcaaaacctcgttttgttcgtgtaaatactctgaagttggatgttgag
tctgccttccacgagttagggaaacagaacatggttcagaaagatgatatggttcctgac
ttgttaatactcccaccaggtagtgatttgcataatcatcctctggtcagaaatggtagt
gttttcatgcaagggaaagcaagctcaatggtggcggtagcacttgggccagagcctgga
tgggaggttcttgatgcatgttcagctccaggaaacaagaccgtgcaccttgctgcactt
atgaatggaaagggaaagattatagcatgtgaactggataatgaaagggttaaacgttta
gaggacactgtccgactttctggggctgctaacatagaagttttgcacggggacttttta
aacctaaatccgatggatccatcatactcaaaggttcgtgctattctcttagatccttcc
tgctctggatctggaaccactgccgagagattagatcatctgctcccgtcatatgctgca
ggcgatgccacagatgttgctggcacagaaaggctaaacaagcttgctgcttttcaaaag
aaggctttggaacatgcattatcttttccagcagtcgagaaagttgtctacagcacatgc
tccatccatcaaattgaaaatgaagacgtaatcaaatctgtcctaccccttgctgcatca
catggttttcaactcgcaacaccattccctcagtggcctcggcgtggcctccctgttttt
gaaggctctgaacatctgcttcgaacccatccagttgaggacaaagagggcttcttcatt
gctctgtttgtcagaaagagcattgccagaagcttggaacagccaatcaaaacccgtaag
aacaacaaggtgaaatctgccaaaagaaatgcaaccatgaaccataataaatctgtgatg
ccttttcctttcactagactgtccaaattgttgctacattctcatctgagattacagact
tacaagaaactaaatctgtctacttga
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