Vitis vinifera (wine grape): 100261230
Help
Entry
100261230 CDS
T01084
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100261230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100261230
03036 Chromosome and associated proteins [BR:
vvi03036
]
100261230
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
100261230
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
100261230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_1st
Ge1_WD40
RMC1_N
CFAP43_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
100261230
NCBI-ProteinID:
XP_059593140
LinkDB
All DBs
Position
5:complement(join(24213729..24213872,24213959..24214540,24214626..24214895,24215054..24215329,24215728..24215780,24215938..24215983))
Genome browser
AA seq
456 aa
AA seq
DB search
MADPLSVLLLARLSRGSLNSCPQQVQFLQRWENLDRFIPNRSAMDFDFAHYMLTERGKGK
ENQSVVRSQSKEAYLKLLAETFNMNRSRILAFKNKPPTPVKLIPDEFYSSVHQSKPSKPL
RRIPQTPERTLDAPDIIDDFCLNLMDWGSSNVLALALQNTVYLWDASNGSASELVTVDDE
NGPVTSVSWAADGQYIAIGLKSSDVQLWDSTANRLLRTLRGGHQSRVGSLDWKNHILTTG
GMDGQIINNDVRVHSHIVATFRGHRQEVCGLKWSTSGQQLASGGNDNLLYIWDRSMASMH
SRSQWLHRLEDHTAAVKALAWCPFQRNLLASGGGGSDGCIKFWNTHTSACLNSVDTGSQV
CALLWNKNERELLSSHGFMQNQMTLWMYPSMVKIAELTGHTSRVLFMAQSPDGRTVATAA
GDETLKFWNAFGTPEVKKAAPKAEHPGPFPHLRRIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccctttcggttctcctccttgcacgcctctccagagggtctttgaattct
tgccctcaacaggtgcagtttcttcaaagatgggaaaatttggacagattcattccaaac
agatcagcaatggacttcgactttgcccattacatgttgactgaaagggggaaaggcaaa
gagaaccaaagtgttgtcaggtctcaatccaaagaggcctacttgaaactactggctgag
acattcaacatgaatcgctctcgcatcctcgcctttaagaacaaaccacctactccagta
aaattgataccagatgaattctattcttctgttcatcaatccaagccctcaaagcctctg
cggcgtattcctcagactcctgagaggacattggatgctcctgatattatagatgatttt
tgcttgaacttaatggattggggtagcagcaatgttcttgcacttgctcttcaaaacacc
gtatatttgtgggatgcttcaaatggttctgcctcagagcttgtcactgttgatgatgag
aatggccctgttacaagtgtgagttgggctgctgatggacaatatattgccattggcttg
aagagttctgatgttcagctatgggattctacagctaatcgactgctgaggactctgaga
ggtggccaccaatcacgagttggttctctagattggaaaaaccacatccttacaactggg
ggaatggatggtcagatcattaacaatgatgtgagagtgcactcgcacattgtggcaact
tttagaggacaccggcaagaggtttgtggactgaaatggtctacctctggccaacagtta
gcgagtggaggaaatgacaatttactctacatctgggataggtcgatggcctctatgcat
tcacgttctcagtggcttcacaggcttgaggatcacactgctgcagtaaaagcgcttgct
tggtgcccttttcagcgcaatttgctggcttctggaggaggtgggagtgatggttgcata
aagttttggaacacccacactagtgcatgcttgaactcagtggacactggctcacaggtt
tgtgctctgctgtggaacaagaacgagcgtgagttgcttagctcccacggctttatgcag
aatcaaatgaccctctggatgtatccatcaatggtgaagattgctgagcttactggtcat
acatccagagttcttttcatggctcagagtccagatgggcgtacagtggcaactgctgca
ggagatgagactctcaagttctggaatgcttttggcacgccagaagtgaaaaaggctgca
ccaaaagcagagcatcctgggccatttcctcatttaaggagaatccgttag
DBGET
integrated database retrieval system
