Vitis vinifera (wine grape): 100261263
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Entry
100261263 CDS
T01084
Name
(RefSeq) transcription initiation factor TFIID subunit 15b isoform X1
KO
K13098
RNA-binding protein FUS
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100261263
09122 Translation
03015 mRNA surveillance pathway
100261263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100261263
Spliceosome [BR:
vvi03041
]
Complex A
Other components
Complex A specific factors
100261263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
100261263
NCBI-ProteinID:
XP_010657456
UniProt:
A0ABY9CX34
LinkDB
All DBs
Position
12:complement(join(9363073..9363190,9371840..9371921,9371997..9372147,9372568..9373288,9373431..9373554,9373797..9374025))
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AA seq
474 aa
AA seq
DB search
MSGVYGHDGDESGQPPSSGGYGGGGGYGGGGYGGGGGGGGYGGNSGGGGGGRGGGYGGGG
GRGGGGGGYGGNSQNRGGGGGGGYQGGDRGGRGGGGGGRGGGRGGSGRDGDWLCPNPSCG
NLNFARRVECNKCGAPSPAGAGSDRGGGGGYNRGGSGGGFGGNRGGRGGNYEGGSGGNRG
GNYEGGSRGGSYGGNQARGGGGDGGFGQVPPAAPQSYGGGSAGYYPPPNSFGGNTNYGGE
AVPPPTSYTGGPTSYPPSYGGPASGYDGLGDTRGGGRAGPPAGGYDGGFGGPRQQGGGYA
GGGGGGGGGGSTTEAPVKVKQCDENCGDSCDNSRIYISNLPPDVTVDELRELFGGIGQVG
RIKQKRGYKDQWPWNIKIYTDEGGNNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVA
MAEKSAPRAPPAFGHGGGGRGGYGGGDRRRDNYRDNAGSGPDRHHHGGNRSRPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgtgtacggtcacgacggcgacgaatcgggtcagcctccctcctccggaggc
tacggcggtggcggtggatacggaggaggaggatatggtggcggaggcggtgggggaggt
tatgggggtaatagtggtggcggaggtggtggacggggtggagggtacggtggcggtggg
ggcagaggaggtggtggaggaggatatgggggtaattcacagaatcgaggaggtggaggt
ggcggaggataccaaggaggggatcgtggcggccgaggtggtggcggcggtggaagggga
ggtggccggggaggaagcggcagagatggggattggctttgccccaatccaagctgcggg
aatctgaactttgcaagaagagttgagtgtaacaaatgcggtgcaccctctcctgctggt
gcaggcagcgatcgtggtggtggcggcggctataacagaggaggaagtggtgggggattt
ggtggtaatcgagggggaagaggtggtaattatgagggtggcagtggaggcaatagaggt
ggtaattatgagggtggtagtagagggggttcttatggtggtaatcaggcaagaggtggg
ggtggagatggtggttttggacaagttcctccagctgcaccccaatcttatggtggtggg
tctgctggatattatcctcctccaaattcttttggtggaaacactaattatggtggagag
gctgttcctccaccaacaagctacactggtgggcctacatcgtatcccccatcatatggc
ggccctgcgagtggttatgatggtctaggtgatacaagaggtggtggtcgggctggtcca
cctgctggtggatatgatggtggatttggtggtcccagacaacagggaggtggttatgct
gggggtggaggtggaggtggaggtggaggcagtactactgaggcccctgttaaggtgaag
caatgcgatgaaaattgtggggattcttgtgataattcaagaatttacatatcaaatttg
ccaccggatgtgactgttgatgaattgagagagctttttggtggcattggacaagttgga
agaattaagcagaagcgaggttataaggatcaatggccatggaatataaaaatatacact
gatgaaggtggaaacaacaaaggcgatgcatgtttgtcttatgaggatccttctgctgcg
cattctgctggtggtttttataacaattatgaaatgaggggctataaaatcaatgttgca
atggcagagaagtctgcaccaagggctccacctgcttttggccatgggggtggtggtaga
ggtggctatggtggtggggaccggcgcagagacaattacagggacaatgcaggttctggt
ccagatagacatcatcatggtggaaatcgttcgcgtccatactga
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