Vitis vinifera (wine grape): 100261441
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Entry
100261441 CDS
T01084
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100261441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
100261441
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100261441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_22
AAA_2
AAA_16
TIP49
Nucleolin_bd
RNA_helicase
nSTAND3
AAA_17
AAA_28
NPHP3_N
AAA_33
Bac_DnaA
IstB_IS21
Mg_chelatase
NACHT
Parvo_NS1
ATPase_2
Viral_helicase1
AAA_18
AAA_3
Rad17
NB-ARC
ABC_tran
TsaE
AAA_11
AAA_19
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
100261441
NCBI-ProteinID:
XP_002266185
UniProt:
F6HG51
A0ABY9BFG6
LinkDB
All DBs
Position
1:join(24392647..24393619,24394248..24394864,24398200..24398352,24399897..24400013,24400112..24400216,24401870..24401935,24402056..24402120,24402203..24402404,24402560..24402691,24402801..24402848)
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AA seq
825 aa
AA seq
DB search
MIGFDRVLVHRLQSCKDNYQTLDAIINHLCRKYPEYSRKKRQPFTRLVQQALESLQQPHR
STKKKKNEPLTSNLDDDNQEFSDSARTRKRPKKINESEERLVRRELEHYRRMQRDQERPS
TSSDSDSDSDSNSSSSSSCDSEDGAVSTSENADAIYEEKVEPECDLMKEMMRATYAKSAS
KNVESKNENPRLIEDKNIELEVGDKQKSKIGMVEGGGVGKGLGKGSKKEVKGSVSTGVEV
SGKDGPMFSDLGGMKSVVEDLKMEVIVPLYYPELPRWLGVRPMAGILLHGPPGCGKTKLA
HAIANETKVPFYKISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKREN
LNREMERRIVTQLMTCMDESNRLVQPADGDKESEISHHKPGYVLVIGATNRPDAVDPALR
RPGRFDREIALGVPDESARADILSVITRNLRLEGSFDLAKLARSTPGFVGADLAALANKA
GNLAMKRIIDRRKFELSRELTDEEHIEDWWRQPWLPEEMEKLSITMADFEEAAKMVQPSS
RREGFSTIPNVRWEDVGGLDFLRQEFDRYIVRRIKYPEDYEEFGVDLETGFLLYGPPGCG
KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT
TKRGKEGGWVVERLLNQLLIELDGADQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLYVP
LPSPDERGLILKALARKKPIDASVDLIAIGQKEACNNLSGADLSALMNEAAMAALEEKLA
DCSSGAISWTINAKHFDQALGKISPSVSNKQKHFYQVLSESFKAE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgataggattcgatcgggtccttgtccatcgtctccagtcttgcaaagacaactaccaa
accctagacgccatcatcaaccatctctgcaggaaatacccggagtacagtcgcaagaag
cgccagcctttcaccagactcgtccaacaagccctagagtcattgcagcaaccccaccgc
agcaccaagaaaaagaagaacgaacccttgacctcaaatctcgatgatgacaaccaagag
ttcagtgacagcgcccgcactcgtaagaggcccaagaagattaatgagagcgaagagaga
ttggtccgtcgggaattggagcactaccggaggatgcagagggatcaggaacgtccatcc
acgtcttcggattcggactcggattcggattcgaattcgagttcgagttccagttgtgat
agcgaagatggcgcggtgtcgacgtccgaaaatgcagatgccatctatgaggagaaggtg
gagccggagtgtgatttgatgaaggagatgatgcgagcgacgtacgccaagtcggcttcg
aaaaatgtggagtccaaaaatgaaaatccgagactgattgaagacaagaatatcgaattg
gaggtcggtgataagcagaagagtaagattggtatggtagaaggaggtggagttgggaag
ggattggggaagggctcgaagaaagaagtgaagggttctgtttcgaccggtgttgaggtg
agtggaaaggatggaccgatgtttagtgaccttggagggatgaaaagcgtggtggaggac
ttgaagatggaagtgattgttccgctgtattatccagaattgcctcgttggttgggagta
cgcccaatggcgggaattttgttgcacgggccgcctggttgtggaaagaccaagttggct
catgccattgctaatgagactaaagttccattttacaagatatcagcgactgaggtggtc
tctggtgtatcaggtgcatcagaagagaatattagggagcttttctcaaaagcatacagg
accgcaccatcaattgttttcattgatgaaattgatgcaattgcctcaaaaagagaaaac
ctaaatagggagatggagcgacggattgtgacacagttgatgacttgcatggatgaatcc
aacagacttgtacaacctgctgatggagataaagaatcagaaatctctcatcacaaacct
ggttatgtacttgttataggagccactaataggcctgatgctgttgaccctgcactaagg
aggccagggcgttttgatcgtgagattgctttaggtgttccggatgaaagtgctagggct
gatattctttcagtaattacacgcaatcttagacttgagggttctttcgatcttgcaaaa
ttagctaggtccacaccagggtttgttggagctgatttggcagcactggccaacaaggct
ggtaaccttgccatgaagagaattatagacagaagaaagtttgagctgtctagagaacta
acagatgaagaacatattgaagattggtggaggcagccatggttgcctgaagagatggaa
aaacttagcattacaatggcagattttgaggaagcagctaaaatggttcagccctcttct
agaagagaaggattctctaccattccaaatgtaaggtgggaagatgttggagggcttgat
tttttaaggcaggaatttgaccgttacatagttaggcgtattaaataccctgaggattat
gaggaatttggtgtggatttagagacaggatttttgctttatgggcctcctggctgtggt
aaaacactaattgccaaggctgttgcaaatgaagcaggggccaatttcatacatattaag
ggccctgaacttctgaataaatatgttggagaaagtgagctggcagttaggacgctattt
agtcgagcaaggacatgttctccatgcatactattttttgatgaggtggatgctttgaca
acaaagcgtgggaaggaagggggatgggttgttgagcggcttctaaaccagctattgata
gagttagatggtgcagatcagcggcggggtgtttttgttattggtgccacaaatagacct
gaggtgatggaccgtgccgtgttacggcctggtaggtttgggaaacttctttatgtacct
ttgcctagtccggatgagcgtgggttgatcctaaaagctcttgctaggaagaagcctata
gatgccagtgtggatttgattgccataggacagaaagaggcttgtaacaatctaagtggg
gctgatctttctgcactgatgaatgaagcagccatggctgctctggaagagaaactcgca
gattgcagttcaggtgcaatttcatggactataaatgcaaaacattttgaccaagcactt
gggaaaatctctccatctgtctcaaacaagcaaaaacacttctaccaggttttgtcagaa
agcttcaaagcagaatga
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