KEGG T01084: 100261572

Vitis vinifera (wine grape): 100261572

Entry

100261572         CDS       T01084

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4 isoform X2

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:vvi00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100261572
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100261572
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100261572
Membrane trafficking [BR:vvi04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    100261572
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    100261572
Exosome [BR:vvi04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100261572

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank BAR Ank_2 PH Ank_3 Ank_5 Ank_4 PH_11 ANK_LRRK2 PH_8 PH_20 STX6_10_61_N PH_13 DUF4573

Other DBs

NCBI-GeneID:

100261572

NCBI-ProteinID:

XP_002272175

LinkDB

Position

1:complement(join(22361362..22361476,22362493..22362953,22371402..22371492,22375145..22375266,22387025..22387288,22387385..22387471,22388824..22389042,22393910..22394041,22395078..22395293,22405789..22405830,22405925..22406020,22406108..22406155,22416128..22416193,22422129..22422173,22425639..22425701,22437871..22437941,22438597..22438697,22451204..22451280,22454143..22454193))

AA seq 788 aa
MAANFIRLDDSPMFMKQVYSLEQTSEDLKDRCQILYKGCKKFMTAIGEAYNGDISFADSL
EAFGGGQDDPISVSIGGPVLSKFITAFRELATYKELLRSQVEHVLLDRLMHFITVDLHDA
KESRKRFDKAIHAYDQSREKFVSLKKGTREDIVAELEEDLQNSKSSFERSRFNLVNSLVK
IEAKKKYEFLESFSAIMDAHLRYFKLGYDLLSQLEPFIHQVLTYAQQSKELANIEQDKLA
KRIQAFRTQTELESLKASTNMEASRHASGIHAVGMSSYKNIEAIMQSTTKGEVQTIKQGY
LLKRSSSLRGDWKRRFFVLDSQGTLYYYRNKGTKSMGSQPNYSAGSMEHNSSMFSRFRSK
HNKASLLNEENLGCHTVDLRTSTIKIDAEDSDLRLCFRIISPAKTYTLQAENGADRMDWI
NKITGVIASLLNSHILQQPHPGTKLLDNNDSAISAYDVRSLNGLPEDDLKVNQADNVSKV
LREIPGNDLCAECSAPEPDWASLNLGILLCIECSGVHRNLGVHVSKVRSITLDVKVWEPP
ILDLFRTLGNTYCNSIWEELLLLQKERLGESNVFSSTVMKPCPKDAIHQKEKYIQAKYVE
KHLVSKEATVADIPSANSIWEAVKSNNLREVYRLIVKSDVSIINTTYDELVGVNLHHTID
AQESEVGCHSVERKQYDPSVCQRIKDSSSPANCLQGCSLLHLACHLGNQVMVELLLQFGA
DINMRDFHGRTPLHHCISRGNNKLAKFLLRRGVRPSIKDGGDLSALERAMELGAITDEEL
FILLAEGQ

NT seq 2367 nt +upstreamnt +downstreamnt
atggcggctaatttcatcaggctcgacgattccccaatgttcatgaagcaggtatattct
cttgaacaaacatcggaggacttgaaagatcgctgccagatactgtacaaaggatgtaaa
aaatttatgacagctattggagaggcttataatggagacatctcttttgcagattcttta
gaagcatttggtggtggacaagatgatcctattagtgtgtctataggaggtcccgtccta
tccaagttcattactgcatttcgtgagcttgctacatataaggagcttcttcgttcccaa
gtggagcatgtattgcttgatcggctgatgcactttataactgttgatctgcatgatgct
aaggagtctcgtaagcgatttgacaaagctatacatgcttatgatcagtcacgtgagaag
tttgtgtctttgaagaagggtacacgcgaagacattgtggctgaactagaagaggatcta
cagaactcaaagtcatcatttgagagaagccgctttaatttagtaaattcccttgtgaaa
attgaagcaaaaaagaaatatgaatttttggaatcttttagtgctattatggatgctcat
ctgagatattttaagctgggatatgacttgttgagtcagctggagccatttattcaccag
gtattgacatatgcacaacaatcgaaagaactagccaacattgaacaagataaacttgca
aaaagaattcaagcattcaggacacaaacagagttggagagtctaaaagcttccactaac
atggaggcctcaagacatgctagtggcattcatgctgttggtatgagttcttacaaaaac
atagaagcaattatgcaatccactacaaaaggggaggtgcaaacgataaagcaaggctat
ctcttaaaacgttcttcaagtttgagaggagattggaaaaggaggttctttgtacttgac
agccaggggactttatattattatagaaataagggtacgaaatccatgggatctcaacca
aactattcagctggttcaatggaacataatagcagcatgttcagtagattccgctcaaag
cacaataaagcatcattactcaatgaagaaaacttgggttgtcatactgttgatctccgt
acttcaacaataaagattgatgcagaagattcagatctgcggctttgcttcagaataata
tctccagcaaaaacttatacattgcaggctgaaaatggagcagacagaatggactggata
aacaaaataacaggggttattgcatcccttttaaattctcacattctgcaacagccgcac
cctggaacaaagcttctagacaataatgactctgccattagtgcttatgacgttcgatca
ttaaatggtcttcctgaggatgatctgaaagtcaatcaagctgataatgtttctaaagtt
ctcagagaaattcctggaaatgatctgtgtgcagaatgcagtgctcctgaacctgattgg
gcatctttaaatcttggcattttgttgtgcattgagtgctctggtgttcatcggaatctt
ggtgttcatgtttcaaaggtaagatctatcacattagatgtcaaggtttgggaacctccc
atcttggatctgtttcgcactcttggaaatacgtattgtaactctatctgggaggaacta
ctactacttcagaaggaaagattaggtgaatcaaatgttttctcctcaacagttatgaag
ccatgccccaaagatgcaattcaccaaaaggaaaaatatattcaagcaaagtatgtagag
aaacatcttgtcagcaaagaagcaactgtagctgacattccttctgccaatagcatctgg
gaggctgttaagagtaataatttgagagaagtatatcgccttatagtgaaatcagatgtg
agtatcatcaacaccacctatgatgagttggttggtgttaatttacatcacaccattgat
gcacaagagtcagaggttggttgtcactcagtagaaaggaagcagtatgatccaagtgtc
tgtcagaggattaaggattccagctctccagctaattgtcttcaaggttgttcattattg
catctagcatgtcatttgggcaatcaagtgatggtggagctgttgttgcaatttggtgct
gacataaacatgcgagactttcatggaaggactcctctgcaccattgcatttccagaggg
aacaataaattggcaaagtttctacttagaagaggtgtccgtccttcaatcaaagatggt
ggagatctaagtgcattggaaagagcaatggagttgggagccataactgacgaggagcta
tttattttgcttgccgaaggccaatga

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