Vitis vinifera (wine grape): 100261643
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Entry
100261643 CDS
T01084
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100261643
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100261643
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
100261643
NCBI-ProteinID:
XP_002264417
UniProt:
F6GXK2
LinkDB
All DBs
Position
11:join(17178146..17178517,17179503..17179761,17182322..17182470,17182552..17182794,17182961..17183155,17183986..17184168)
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AA seq
466 aa
AA seq
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MATTGTTEPAPVNGAAQSPGSDPKTELSETPLSASNAATAESEQAPSENLESESTAPPET
EAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGT
SDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVAS
TQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAV
VGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLPAKRES
LYLDRETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIG
GANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEPVPSSY
GKMDSGLRSSYSQLGNTSYSSSSLSSQPYGGGYGSSGVGGYSSYRL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccactggcacaacggaaccagctccggtgaacggcgctgcgcagtctccggga
tctgatccaaagaccgaactatcggagacacctctctctgccagtaacgccgccaccgca
gagtcggagcaggcaccatctgaaaatcttgagtcagagtccacggcgccgccagagacg
gaagctccggcgccggcctcggagaagaaatggccgggatggcctggagactgcgtattc
cggcttatcgtccctgtgctcaaggtcggcagcattattggccgcaaaggcgagctgatc
aagaagatgtgtgaggagactagggctcgcattcgcgtcctcgacggcgccgttggaaca
tctgatcgtattgttttgatatctggaagggaagagccagaggcaccattatcacctgca
atggatgctgtaatcagagtattcaaacgtgttactgggttatctgaaagtgaaggtgat
ggtaaagcatacggagctgctggtgttgcattctgttcaatccggttattggtagcatct
acacaagccattaatttaattggaaaacagggctctttgatcaagtcaatacaggagagc
actggtgcatctgtgcgagtactgtcaggagatgaagtcccgttctatgctgctgcggat
gagagaattgtagagttgcagggagaagccttgaaagttcaaaaagctcttgaagcagtt
gtgggacacctaaggaaattcttggtggatcatagtgttcttcctctttttgagaggact
tacaatgcaacaatctcacaagatcgccaatctgatacttgggcggacaagtcattgttg
catggtacttctcagactggaatgggaagcgattattctcttccagcgaagagggagtct
ttgtaccttgatcgagaaactcagatggaacactctggacttccaatgtatggtcaagaa
catggactctcaggaatacgctcttcaggacttggacgtgctggtgctcctattgttact
cagattgcacaaacaatgcaaataccactgtcatatgctgaggacatcattgggattgga
ggggctaatattgcatatattcgccgtaccagtggagccattctaacagtgcaagagagt
aggggcctgccggatgaaatcactgtggaaattaaaggcacctcatcccaggtccaaaca
gctcaacaactaatccaggaatttataagcaatcacaaagaaccagttccaagcagctac
gggaagatggacagtggcttgaggtcttcatactcacagttgggcaacacatcttactct
tcatcctcactgtcgtcacaaccctatggtggtggctatggatcttctggagtaggaggc
tacagcagttacaggctttga
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