Vitis vinifera (wine grape): 100261683
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Entry
100261683 CDS
T01084
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100261683
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100261683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
GDH_C
DUF4143
Trm112p
Motif
Other DBs
NCBI-GeneID:
100261683
NCBI-ProteinID:
XP_002266602
UniProt:
D7TJK6
LinkDB
All DBs
Position
10:7645572..7647164
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AA seq
530 aa
AA seq
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MEASGSCKGCKKEALIRDDVTGSLVCSSCGLVQPFDNYDPQLGGLNGPQGTFVRVGTTGT
GSSLNYKDKKIFEAQKLIDDLLFKLGFSSEKSNEVRTMVATITEGEFGQGDWLPVLVGAC
SYVVRRQSNRALSIAEVGSVIGSDVYELGQMIRRVVEFLNLKLPDIDIVNSLELAFGQCG
SLNRVSKDKVNKMLKQGTFLVQCAVKWFLTTGRRPLPMIAAILMFVAELNQVDVRIENIA
NEIHAGVATTRLRYKELSEALVKVAQALPWGKDVSTKNIIKNAPFVIQYMEMKSRLLPGK
RRENLESGGFDLDGVVSDCLNKEFDYIPQGYDMENDSQYFEADSESGLDIDNSDKLKLSH
ECLSVIYSRFLNEDSRVNPVGENGGDHSRKRRREYDPPAMNEWWNGKSNMSKKLLLEQIL
EKDVGLDALPPSFVSGCLAYEQRREKINAAKLRISKIMYPSKANMGDTEEFSSEEHLHAK
KKRRKTKKNGIDWEDFVIETLLLHHVKEDEIEKGHYNTLLDLHVFNSGCL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctccggctcctgcaaaggttgcaaaaaggaggctttgattcgggacgatgta
acgggctcgttggtgtgctcatcttgtggactcgtccaacctttcgacaactatgatccc
caattgggtggcctcaatggtcctcaaggtacattcgtccgtgttggcacaacgggcacc
ggcagctccttgaactacaaggacaagaaaatctttgaagcccagaaactcatcgatgac
ttgcttttcaagttagggttttcgagtgagaagtcgaatgaggtcaggacaatggttgcc
accattactgaaggagagttcggtcaaggcgactggcttcctgtccttgttggtgcttgc
tcgtatgttgtaaggcggcagagcaatcgagcattgtctattgctgaagtggggtcggtg
attggttccgatgtttatgagctagggcaaatgattcgccgcgttgttgaatttttgaat
ttgaaattgccggatattgacattgtgaattccttggaattggcgtttggacaatgtggg
agtttgaatagggtttccaaggataaggtgaataaaatgcttaaacaagggacatttttg
gtgcaatgtgcagtgaagtggtttttgacaacggggcggaggccgctgccaatgattgca
gccattttaatgtttgttgcagaattgaatcaagtcgatgttcggattgagaatatagca
aatgaaattcatgctggagtggctacaactaggttgaggtataaagaactttcagaggct
cttgtgaaagttgcccaagcattgccctgggggaaggatgtttccactaagaatataatc
aagaatgcaccttttgtgattcagtatatggagatgaagtcgaggttgctgcctgggaaa
aggagggagaatttggagagtggcggatttgatttggacggtgttgttagtgattgtttg
aacaaagaatttgactatataccacaaggttatgacatggaaaatgactctcagtatttt
gaggcagacagtgagagtgggttggacattgataactcagacaagctcaagctttcgcat
gaatgcttatctgtgatttattccaggtttttgaatgaggattctcgagttaaccctgtt
ggagagaatggtggggatcacagcagaaaaaggaggagagagtatgatcctcctgcaatg
aatgagtggtggaatggaaaatcaaatatgagtaaaaagcttttgcttgagcagatattg
gagaaagatgtaggattggatgctttgcctccatcttttgtttctggatgcttggcatat
gaacagaggagagaaaagataaatgctgctaagttgcgcatcagtaagattatgtatcca
tcaaaggctaatatgggtgacacggaagagttttcctccgaggaacatctacatgctaag
aagaaaaggaggaaaacaaaaaaaaatggaattgattgggaggattttgttattgaaacc
cttctccttcatcatgttaaagaggatgaaattgagaaggggcactacaataccctattg
gatctgcatgttttcaactctgggtgtttgtga
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