Vitis vinifera (wine grape): 100261746
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Entry
100261746 CDS
T01084
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100261746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100261746
Spliceosome [BR:
vvi03041
]
Complex A
Other components
Complex A specific factors
100261746
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
RRM_1
KH_1
KH_12
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100261746
NCBI-ProteinID:
XP_002263312
UniProt:
A0ABY9DHU2
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Position
16:complement(21635446..21637701)
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AA seq
751 aa
AA seq
DB search
MEKHEASYLSRIRKKYSIEVDKPTKVTTVELRAQCVLQSFLDRDNDESEEWELDEFVSLS
HYNDEKEQPIEDPDMDSLGKSVSKSSSDSDPDEAEARLEAISRSLIENKGSLDVIANEPA
PLQDFQTLKKCKQDESSNLEADVGSVVADLHDKSGVPMAPVTDESTSEKQEHAGSSGKRR
LSRRDQKPEVDGETDEGNRTRKRRKTRWTGDDSQLKILGPIQLPSFVKDFVTSDLDPEIQ
ELKVELFEINSKLQRPELHDDRPKEDRSPSPEPVYDYLGNRKNTREVRLREKLIKKRQCI
ISRLIEKNSTFKPAADYKPPKLIKKLYIPEKEYPDYNFVGLIIGPRGNTQKRMEKETGAK
ILLRGKGYSLKTPRRTKASDNEDLHVRIEADNQNSFDAAVRMVEKLLIPIDRGINAHQQA
QLVELGKLNGERNKNMCRCCYDEGHPHYACPHLQSTFQSSLSCDICGSNNHATPSCPLIA
SSQGSNSLWGSSGLEIGSTPDTQSKPNKETSDADLYVGYLPQTMDENCLAELFAPFGKIA
KTKVIKDRATGISKGYGFVKFENPAHAALALSHMHGYKIDGKTLAVREGTRQWVTGSSVL
SPDPNHPGSIAASQDAVRQTGFPVPPGSLLPQHQTMFPETKRMALPPPATYHLGPFDFFP
KSKGLGFPPVSSILNSQGRSGFEYGYIATQVPFSSPSSLLQFPGDPSYPGSQFKSYFATE
TSNPSSSFKISPTPGSNLKPIPWPITHLTQW
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacatgaagcttcatacctttcaaggattagaaagaaatatagcatcgaagtg
gataaaccaaccaaggtaactactgtggagctgcgagcacaatgtgttcttcagtccttt
ttagacagggataatgatgagagtgaggaatgggaacttgatgaatttgtttctttaagc
cattacaatgatgaaaaagaacagccaattgaagatccagatatggattcattggggaag
tctgtgtcaaagtcatcttctgatagtgaccctgatgaagctgaggccaggttggaagcc
atttctagaagtttgattgaaaataaggggtcactagatgtaatagccaatgagccagct
ccattgcaagactttcagacactaaagaagtgcaagcaagatgaatcatcaaacctcgaa
gcagacgttgggtctgtagttgcagatctccatgataaatctggggttcctatggcaccc
gttactgatgaaagtacctctgaaaagcaggagcatgcaggaagttctgggaaacgaagg
cttagtagaagggaccaaaaacctgaagtagatggggaaactgatgaaggcaataggact
cgcaaaagaaggaaaaccaggtggactggtgatgattctcaattaaaaatacttggtcct
attcaactacctagcttcgtgaaagactttgttacatctgatctggatccagaaattcag
gagttgaaagtggaactgtttgagataaatagcaagttgcaaagaccagagcttcatgat
gaccgccccaaggaagacaggtctccttctccagagccagtgtatgattaccttggtaat
agaaaaaatacaagggaagtaaggctccgtgaaaaactcatcaagaagcgtcaatgtatc
atttccaggttgattgagaagaactccacctttaaacctgctgctgactacaagccacca
aagctcattaagaaactctacattccggagaaagaataccctgattataattttgttggt
cttataattggtccacggggaaatactcaaaagaggatggagaaggaaactggggctaag
attcttttaaggggtaaaggttactccttgaaaacgccacgcagaactaaagcttctgat
aatgaagatttacatgtccgtatagaggctgataaccaaaattcctttgatgcagctgta
agaatggttgagaaactactaattccaattgaccgtgggataaatgctcaccaacaagcc
caattagtggagcttggcaaactgaatggagaacgaaacaaaaatatgtgccgatgctgc
tatgacgaagggcatccacattatgcctgccctcacctacaatctacttttcaaagctcg
ctctcttgtgacatttgtggcagcaacaaccatgccacaccctcttgccctttgatagca
tcatctcaaggtagcaactctctgtggggttcatctgggcttgaaattggttcaactcca
gacacacaaagcaaacccaataaagaaaccagtgatgcagatctctatgttggttatctt
cctcaaactatggacgagaattgtttagcagagttgtttgctccattcggtaagattgct
aaaacaaaagtgattaaggaccgagccacaggtattagtaaaggctatggctttgttaaa
tttgaaaatcctgctcatgctgctttggctttatcccacatgcatgggtacaaaattgat
gggaagacattggcagtaagggagggtacacgccaatgggtcacaggatcctcagttttg
agccctgatccaaatcaccctgggtcaatagcagcttctcaagatgccgtgcgtcagacc
ggtttccctgttccaccggggtcattgctacctcaacatcaaaccatgtttcctgaaact
aagagaatggctttgcctcctcccgccacctaccacttggggccgtttgattttttccct
aaaagcaagggattgggttttcctcctgtgtccagcatcttgaactcgcagggtagaagt
ggcttcgaatatggttacattgctacccaagttccattctcgtcacctagttcactttta
cagtttcctggggatcctagctaccctggttcccaatttaagtcatattttgccacagag
acatccaacccatcctcatcattcaaaatcagcccaaccccaggaagtaatctgaaacct
attccttggccaatcacccatcttacacagtggtga
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