KEGG   Vitis vinifera (wine grape): 100261815
Entry
100261815         CDS       T01084                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X2
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100261815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100261815
   03110 Chaperones and folding catalysts [BR:vvi03110]
    100261815
   03029 Mitochondrial biogenesis [BR:vvi03029]
    100261815
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100261815
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     100261815
Messenger RNA biogenesis [BR:vvi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     100261815
Chaperones and folding catalysts [BR:vvi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   100261815
Mitochondrial biogenesis [BR:vvi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    100261815
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100261815
  Exosomal proteins of other body fluids (saliva and urine)
   100261815
  Exosomal proteins of breast cancer cells
   100261815
  Exosomal proteins of colorectal cancer cells
   100261815
  Exosomal proteins of bladder cancer cells
   100261815
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 100261815
NCBI-ProteinID: XP_002284134
UniProt: D7U0E8 A0ABY9CGJ5
LinkDB
Position
9:join(3634517..3634759,3634854..3634979,3635332..3635469,3635570..3635665,3635902..3636144,3636284..3636518,3636613..3636782,3636860..3636937,3637046..3637117,3637244..3637348,3637479..3637571,3637717..3637809,3638389..3638512,3638606..3638619)
AA seq 609 aa
MASSFATMSSIGYFTSSSSHTMDKKFLGSSRRLSSFASISANSFEGRKQSMVLQKRCSPK
VRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV
AREVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVQI
TRGIENTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEVGYMIAEAMGQVGRKGVVTL
EEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVL
EDAIKGGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTG
GTVIREEVGLSLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLVEAAD
QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
TLLRLAAKVDAIKDTLDSDEQKVGADIVKRALSYPMKLIAKNAGVNGSVVIEKVLSSDNP
KYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVVDIKEPEPIPAGN
PMDNSGYGY
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcatcatcttttgccaccatgtcttctattgggtatttcacatcgtccagcagtcat
acaatggataagaagtttctgggttcttccagaagattgtcttcatttgcttccatatct
gcgaattcttttgaaggcaggaaacagagtatggttttgcagaagagatgttctccaaag
gttagggcaatggccaaggagttgtatttcaacaaggatggctctgctattaagaagctt
caaacgggtgttaataagcttgctgatctagtgggggttactcttggtccaaaagggagg
aatgttgttctggagagcaagtatgggtccccgaaaattgttaatgatggtgttactgtg
gcaagagaggtagagttggaggaccctgttgagaacataggtgctaggttggtgagacaa
gctgcttcaaaaaccaatgatttggctggtgatgggacaactacttctgttgttctggct
caaggcttgattactgaaggtgttaaggtggtagcagctggtgccaaccctgttcaaatc
actaggggtattgagaacaccactaaagctctggtggctgagctgaagttgatgtcaaag
gaggttgaagacagtgaactagcagatgtggctgcagttagtgcaggaaacaactatgaa
gtaggatatatgatagctgaagctatgggtcaagttggcagaaagggtgttgtgactctc
gaagaaggaaaaagtgctgagaacaacttgtatgttgtggaaggaatgcagtttgatcgt
ggttatatctctccttacttcgtcacagacagtgagaaaatggctgttgaatatgaaaat
tgcaagctgcttttggttgacaaaaagatcacaaatgcaagggatctcattaatgttttg
gaagatgccatcaaagggggatatccaatcttgataattgcggaagatattgagcaggaa
gctcttgcaactcttgttgtgaataagctcaggggggcattaaagattgctgcactgaaa
gctcctggatttggagagcgcaaaagccaatatcttgatgatattgctatcctcactgga
ggaaccgtgattagagaggaggttgggttatcattggacaaagctgaaaaggaggtcttg
gggcatgctgctaaagtggtgctcaccaaggatacaactacaattgttggtgatggcagt
acacaggaagcagtaaataagcgagttgcgcagatcagaaaccttgttgaggcagcagat
caggactatgaaaaagagaagcttaatgaaagaattgcaaaactttcaggtggtgttgct
gtcattcaggtcggagcacaaactgaaacagaacttaaagaaaagaaattgagagtggag
gatgcccttaatgcaacaaaggcagccgttgaggaaggtattgtggttggtggcgggtgc
acattgttgcgtctagcagcaaaagttgatgctatcaaagacactcttgatagtgatgag
caaaaggttggagcagatattgttaagagggcactaagctacccaatgaagttaatcgcc
aagaatgcaggggtcaacggaagtgttgtgatcgaaaaggtgttgtccagtgacaatcca
aaatatggttacaatgctgcaactggaaaatacgaggatttgatggctgctggtataatt
gatcccacgaaagtggtgagatgttgtttggagcatgcagcttcggttgcaagaaccttc
ctcacatctgatgctgtggtggttgacatcaaggagcctgaacccattcctgctggaaat
ccaatggataattcaggttatggatactga

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