Vitis vinifera (wine grape): 100261825
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Entry
100261825 CDS
T01084
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100261825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100261825
03036 Chromosome and associated proteins [BR:
vvi03036
]
100261825
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100261825
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100261825
PBAF complex
100261825
GBAF(ncBAF) complex
100261825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
100261825
NCBI-ProteinID:
XP_002273749
UniProt:
F6H3Y6
LinkDB
All DBs
Position
14:complement(join(25640804..25640876,25641434..25643007))
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AA seq
548 aa
AA seq
DB search
MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQA
HVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNS
NMKRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALY
TQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPT
WTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENAR
SPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHY
VKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGN
CPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFL
GFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVA
GSDAPGST
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaataacaataatccacccaagaaccttggggcttcttcttcgccctttggc
aatgccggaatgggttctcctgctatgcctgcaaatcctgtgttctcgcaaccgcaagct
caggggcaaattgggggtggctttcagggtcagtttcagctgtcccaggctcatcaagcc
catgtcattgcccaggcacattctaaagcacaagctcatgcccaagctcaagcgcaggct
gcccacgcccagttccaagctcagttacaggctcaaggaatgacccttaatcagtcccaa
ggcattgggattgggaatatgggtggatcttcaccctccataggagcacccggcaattca
aacatgaaacggactttgcagaagcctccagtacgccctcctggccctttaggtgctaat
actatctctcctttgaaagtcatggaacttacacctgctgcccgcagaaagaagcagaag
cttccagagaagcaattacaagatagagtggcagcaattctgccagagtctgctttgtac
acacaactccttgagtttgagagtcgagttgatgctgctctagctaggaagaaaattgac
attcaagaggcacttaaaaaccctccttgtgttcaaaaaactcttcgaatttatattttc
aacactttcgctaatcagattcgcacaattcccaagaagccaaatgcagagccacctacc
tggaccctcaagataattgggaggatcttggaagaaggggtagatcctgaccaggctgca
atgctccacaaatcaaatgtctcgtacccaaaattctcgtctttcttcaagagagtcacc
atttcccttgaccagagactatatcctgataaccctattattatatgggagaatgctcga
tccccagcacctcatgagggctttgaggtaaagagaaagggggataaagaatttactgtg
aatatacggttagaaatgaattatgtgcctgagaagtttaagctttcttcagctttgatg
gaagttcttggtattgaggttgatacacgcccaagaattatagctgcaatatggcattat
gtgaaggctagaaaattgcagaaccccaatgacccttcatttttcaattgtgatccgcct
cttcagaaagtgttcggggaagacaagatgaaattcaccatggtgtcacagaagatatca
cagcatttgtctcctccgcaacctatacatttggaacataagatcaagctttcggggaat
tgtccagctggaaatgcatgctatgatgtgttggttgatgtcccctttccaatacagaag
gaattgtctgctttattggctaacacggagaaaaacaaagagatcgatgcatgtgatgaa
gcaatttgttctgctataagaaagatacatgaacaccgtcggaggcgggcattctttctt
gggtttagtcaatctcctgtggaatttattaacactttgattgaatctcaaagcaaagat
ctgaagctagtggctggggaagctagtcgcaatgctgaaaaggagcggcgatcggacttc
ttcaaccagccatgggttgaagatgctgtcattcgttatctgaatcgcaagccagttgct
ggaagtgacgctcctgggagtacatga
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