Vitis vinifera (wine grape): 100261882
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Entry
100261882 CDS
T01084
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100261882
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_9
PAS_4
PAS_8
PAS_3
PAS_10
Motif
Other DBs
NCBI-GeneID:
100261882
NCBI-ProteinID:
XP_002278263
UniProt:
A0A438GB15
F6H723
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All DBs
Position
5:join(1204061..1206128,1207112..1207919,1208787..1209080,1211358..1211577)
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AA seq
1129 aa
AA seq
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MSSGNRGTQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYS
QSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQ
SVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILH
RIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRE
LTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVD
CHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGNDEEAIG
GRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQT
LLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLAN
HADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHH
PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKA
VMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVE
EAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNACS
SRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSE
WNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFS
FFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKEL
AYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGS
LELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFL
LNMVRYAPSPDGWIEIQVHPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWM
TQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPVPRRGSKSVD
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggaaacagaggaacgcagtcgcaccaccaagctcagtcgtcggggacaagc
aatttgagagtttaccacactgattcaatgagcaaagccattgcgcagtatacaatggat
gctcgcctccacgccgtatacgaacagtccggcgagtccggtaagtcattcgactactcg
cagtcggttagaaccacaacgcaatcggtccctgagcaacaaatcactgcgtatttatcg
aaaattcaacggggtggccatatacagccctttgggtgtatgcttgcggtcgatgaggcc
acttttcgggtcattgctttcagcgaaaatgcccgagaaatgctcggtctcactccgcaa
tcggttccgagccttgagaagcccgagatcctcctagtaggtactgatgttcgcacgctt
ttcactccctcgagcgcagttctcctcgaaaaggcgtttggggctcgggaaattacgttg
ttaaatcccgtgtggattcattccaagaattctggaaaacccttttacgcaattttgcat
agaattgatgtgggaattgtaattgatttggagcctgcaaggactgaggaccctgctctg
tctattgctggggcggtgcagtcgcagaagttggccgttcgagcaatttcccatcttcaa
tctcttcccggtggtgatattaaccttttgtgtgaaactgtggttgagaatgtgagggag
cttactgggtatgatcgggtcatggtttacaaatttcacgaggatgaacatggtgaggtc
gtggctgagagcaagaggtctgatttggagccttatattgggttacactatcctgccacg
gacattccacaggcttcaaggtttttgtttaggcagaatcgggttaggatgatcgttgat
tgccatgccacgcctgttctggtgattcaagatgaagggcttatgcagcctctatgctta
gttggttcaacccttcgggctcctcatggctgccatgcacagtatatggccaacatgggt
tcaactgcctcattagcgatggctgtcatcatcaatggaaatgatgaggaagctattggt
gggcgaaacttgatgaggctatggggcctggttgtttgccatcacacatctgctaggtgc
attccatttcctcttcgatatgcctgtgagttcctaatgcaggcatttggactccaattg
aacatggaactgcagttagcatcgcaattgtctgagaaacatgttttaaggacccagact
ctcttgtgtgacatgctccttcgtgattcccctactggaattgttacccaaagtcctagt
attatggatcttgtgaagtgtgatggagcagcactttattgccaggggaagtattatcca
actggggtgaccccgactgaagcccagataaaggatattgcagagtggttgttggcaaac
catgcggattcaacaggtttaagcactgacagtttggctgatgctggctaccctggggca
gcctcacttggtgatgcagtttgtggaatggctgttgcttatatcacttcaagagatttt
ctattctggtttcggtcccacacagcaaaagagatcaaatggggtggtgcaaagcatcat
ccagaggacaaggacgatgggcagaggatgcatcctcgttcttcattcaaggcattttta
gaagtggtcaagagtcggagtttgccatgggagaatgcggaaatggatgcaattcattct
ctgcagcttattctgcgtgactcttttaaggatgctactgatggaagcaattctaaggct
gtaatgcatgctcagctcggggagctagagttgcaagggatggatgagttgagctctgtt
gcaagagaaatggttaggttgattgaaactgcaacagctcccatatttgcggtcgatgtt
gatggctgcataaatggttggaatgcaaaggttgcggagttgacggggctttctgttgag
gaagctatggggaagtccttggttcatgatcttgtttacaaggaatctgaagaaactgtt
gacaagcttcttcatcatgctctacaaggtgaagaagataagaatgtagagataaaattg
aggacatttgactcacaacagcataagaaggctgtttttgtggtcgttaatgcttgctcc
agtagggattacacaaataatatagttggagtttgctttgttggtcaggatgttactggt
cagaaagtggtaatggacaaatttatccatatacaaggtgattacaaagctattgtacat
agtcccaaccctttgattcctcctatatttgcttcagatgagaacacagtttgctctgag
tggaacactgccatggaaaagctcactgggtggagcaggggggacatcattgggaagatg
ttggttggggagatttttggcagtagctgtcggctgaagggtccggatgctctgacaaaa
ttcatgattgtgttgcacaatgcaattggagggcaagacacagacaagtttccattttcc
ttctttgaccagaatggaaaatatgtgcaagctcttttgacggcaaataagagagttaat
attgagggccagattattggtgccttctgctttttgcagattgcaagtcctgaattgcag
caagctctcaaagtccaaaggcaacaggagaaaaaatgctttgcaaggatgaaagagttg
gcttacatttgtcaggaaataaagaaccctttaagtggcatacgtttcactaactctctt
ttggaggccactgacttaactgaagatcaaaagcagtttcttgagactagtgctgcttgt
gagaagcagatgtcaaagatcataagggatgttgatctggacagcattgaggatggttca
ctggagcttgagagggctgaatttttacttggaagtgtcataaatgctgttgttagccaa
gtaatgatattgttgagggaaagagatttacaattgatccgggacattcctgaggaagtc
aaaacactggctgtttatggtgatcaagtaagaattcaacaggttttggctgatttctta
ctgaatatggtgcgttatgcaccatccccagacggttggatagagattcaagttcatcca
agattgaagcaaatttctgaagaagtaaaacttatgcatattgaattcaggatggtatgc
cctggtgaaggtcttcctcctaatctgattcaagacatgttccatagcagtcgttggatg
actcaggaaggtctagggctgagcatgtgcaggaagatcttaaagctcattaatggcgaa
gtccaatatatcagagaatcagaaagatgttattttctaatcagcatagaacttcctgta
cctcgcagaggctcaaagagcgttgactag
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