KEGG   Vitis vinifera (wine grape): 100261898
Entry
100261898         CDS       T01084                                 
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100261898
   03036 Chromosome and associated proteins [BR:vvi03036]
    100261898
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     100261898
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     100261898
    SLIK complex
     100261898
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HTH_CHD1_Hrp3 Chromo CHD1-like_C HDA2-3 ResIII DEAD SWI2_SNF2 Chromo_MIT1
Other DBs
NCBI-GeneID: 100261898
NCBI-ProteinID: XP_002275100
UniProt: A0ABY9C429
LinkDB
Position
6:complement(join(20066383..20066894,20066982..20067075,20067166..20067525,20069740..20069921,20070036..20070213,20070333..20070488,20070766..20071002,20071122..20071202,20071455..20071634,20071893..20071979,20072150..20072260,20072343..20072585,20073592..20073804,20074110..20074173,20074261..20074385,20074530..20074623,20080595..20080662,20080849..20081040,20084336..20084470,20084629..20084716,20084830..20084923,20087415..20087478,20087888..20087939,20088187..20088290,20088403..20088462,20095043..20095126,20095287..20095511,20099328..20099774,20105248..20105315,20105487..20106183))
AA seq 1764 aa
MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGD
TNDAGLQNEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPMGHRNGSESEQDSK
CRFDCKNEEALEDNSSDGREVDKVQKGQNDVPADEMSSDDYYEQDGEDQSDSLHYRGLNH
SSVLNSQPQSRPVAVNMARNSKASNDNEYDDDEDGDNDGDADYEDEDEEEEDEDDPDDAD
FEPDYGVTSSRTANKYQDKDWNGEDSDEDDNSNDDLDVSDEDDAYYMKKPKGRLRGNSGR
GLKPTKEHKSFPAPGRRKRGRTLLEDEDSYEKDSENDSDEDFKSMTRRGAHLRKSKGGQS
STTANIIGRNSELRTSSRSVRKVSYVESEESEEIDEGKKKKSQKEEIEEEDCDSIEKVLW
HQPKGMADEALKNNKSTEPILLSHLFDFEPNWNEMEFLIKWKGQSHLHCQWKSFSDLQNL
SGFKKVLNYTKKVMEEVKYRNMFSREEIEVNDVSKEMDLDLIKQNSQVERIIAYRIGKEG
SGDVMPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEYKAREAAAAIQGKMVDMQRKKSK
ASLRKLDEQPGWLKGGQLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFL
QNAQQIYGPFLVVVPLSTLSNWAKEFKKWLPDLNVIVYVGTRASREVCQQYEFYTNKKTG
RTILFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSAKNKLLI
TGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEMELANLHMELRPHILRRV
IKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKC
CNHPFLFESADHGYGGNRSTNDCGKLERLILSSGKLVLLDKLLEKLHETNHRVLIFSQMV
RMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLA
TADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDH
LVIQKLNAEGRLEKKESKKGSYFDKNELSAILRFGAEELFKEDKNEEESKKRLLSMDIDE
ILERAEKVEEKETGEEGNELLSAFKVANFGSAEDDGSFWSRWIKPEAVAEAEDALAPRAA
RNTKSYAEANQPERISKRKKKAAEPQERAQKRRKADYLVHLVPRIEGAAAQVRGWSYGNL
PKRDASRFSRAVLKFGNPSQIGSIVMEVGGTIEAAPTEAQIELFDALIDGCREAVKEGNL
DPKGPMLDFFGVPVKANEVLNRVQELQLLAKRISRYEDPIAQFRVLMYLKPSNWSKGCGW
NQIDDARLLLGIHYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPRAPNLKDRASAL
LEMELVAVGGKNTNTKASRKTSKKEKERENLMNISISRSKDRKGKPGFPVTNVQMRKDRS
HKPHRVEPLVKEEGEMSGNEEVYEQFREVKWMEWCEDVMKTEIKTLNRLHKLQTTSANLP
KDLVLSKIRKYLQLLGRRIDQIVLEHDKEQYKQDRMIMRLWNYISTFSNLSGEKLRQIHS
KLKQEQDEDGGVGSSHVNGSAWGPGDKDSDPGQFPSFHRHGERPPRGYKNMSAYQTAEPV
SKSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNRRF
GNEKPSRMRQSGYPPRQGFSSVIK
NT seq 5295 nt   +upstreamnt  +downstreamnt
atggctttctttagaaactactcgaatgaaacggtagcacagagtgtcctggatgagaag
ggccaagggcaaaacattgatagagttcacagttcagtagcaaatgaatatgtagatgcg
acttcaagtgaaaaggattttgaatcaaaggtggatgggcaatatcaaagtgatggtgat
acaaatgatgctgggctgcaaaatgaggcagcagctgctgatgatattggtttgagaata
tcaaatttgcagccctctggaaggagaacagctatggcagggaagtggggttcaaccttt
tggaaagactgccaacccatgggtcatcggaatggttctgaatctgagcaggattcaaaa
tgtcgttttgattgtaaaaatgaggaagcattggaagacaattcatctgatggcagggaa
gttgacaaggttcagaagggtcaaaatgatgttcctgcagatgagatgtcatctgatgat
tactacgaacaggacggggaagaccaaagtgactcgttacattacagaggtttaaatcat
tccagtgtcttaaactcacaaccacagtcaagacctgttgctgtaaacatggctcggaat
tcaaaagcttcaaatgataatgaatatgatgatgacgaggatggtgataatgatggtgat
gctgattatgaagatgaggatgaggaagaggaagatgaagatgatcctgatgatgcagat
tttgaacctgattatggtgtcactagcagcagaactgccaacaagtaccaggataaggac
tggaatggtgaagattctgatgaagatgataatagcaatgatgatctagatgtctcagat
gaggatgatgcatattatatgaagaaacccaagggtagactacgaggtaacagtggacgt
ggtttaaaacctacgaaagagcataaatcattccctgcacctggtcgaagaaaaagaggc
agaacgttattggaagatgaagattcttatgaaaaggattctgaaaatgatagtgatgag
gatttcaaaagcatgacaaggagaggtgcacatctccgaaaaagtaaaggtggtcagtcc
agtactacagcaaatatcattggacggaacagtgagctccgcacctcaagtagatcagtg
aggaaggtatcatatgttgaaagtgaggaaagtgaagaaattgatgaaggcaagaagaaa
aagagccaaaaggaggaaattgaagaggaagattgcgattcaatcgaaaaggtgctttgg
catcagccaaaaggcatggctgacgaggctctaaagaataataaatcaacagagcccatt
ctgttaagccacttgtttgactttgaacccaactggaatgagatggagttcttaataaaa
tggaaaggccagtctcatttgcactgtcagtggaaatcattttctgatctacaaaatctt
agtggttttaagaaggttttaaattacaccaaaaaagtgatggaggaagtgaagtacagg
aacatgttttcacgtgaggagattgaagtcaatgatgtaagcaaggaaatggacttagac
ctcattaaacaaaatagtcaggtggagagaataattgcatacagaattggtaaagagggc
tcaggtgatgtgatgccagagtatttagtcaagtggcagggactctcatatgctgaagca
acatgggagaaggatgtagatattgcatttgctcaagatgctattgatgagtacaaggct
cgtgaagctgcagctgccatccaaggaaaaatggtggacatgcagcgtaagaagagtaaa
gcaagtttaaggaagcttgatgagcagcctgggtggttaaagggaggacaacttcgtgat
tatcagcttgaaggcttgaattttcttgttaacagctggagaaatgatactaatgttatt
ttggctgatgaaatgggtcttggcaaaactgtgcagtcagtttctatgcttgggtttttg
cagaatgctcaacaaatatatggaccatttcttgttgttgtaccattatcgactttatca
aactgggcaaaagaattcaagaagtggcttcctgacttgaatgtcattgtttatgttggg
acccgtgctagccgagaggtttgtcagcaatatgaattttacactaataagaaaactggc
aggactattctattcaatgctttattgactacttatgaagtagttctgaaggacaaggct
gtgctttctaagatcaaatggaactacctcatggttgatgaagcccacaggttaaagaac
agtgaagcacaattgtatacaaccctctcggaattcagtgccaagaacaagttgctgatc
actggtactccattacagaacagtgttgaagagctttgggctctacttcacttccttgat
cctgataaattcaagaacaaagatgattttgttcagaattacaagaatcttagctcattc
aacgaaatggagcttgcaaatcttcatatggaattgaggccccatattcttcgaagagtt
atcaaggatgtagagaagtctttgcctccaaaaattgaacgtattcttagggttgaaatg
tcccctcttcaaaaacagtattataagtggattttggaacgcaatttccatgacttgaac
aaaggagttcgtgggaatcaggtttcacttctaaatattgttgtagaattgaagaaatgc
tgcaatcatccttttctatttgaaagcgcagaccatggttatggtgggaacagaagtacc
aatgactgcggtaaactggagaggcttattttaagcagtgggaagcttgttttacttgat
aagctacttgagaaattgcatgagacgaatcatcgtgttctaatattttctcagatggtt
agaatgttggatatactggcagaatatatgtcacttagagggttccaatttcagcggctt
gatggtagtacaaaggctgagttgcgtcagcaggcaatggatcattttaatgcacctgga
agtgatgatttctgtttcctcctttcaacccgtgctggtggcctgggcattaaccttgca
actgcagacacagttattatatttgattctgactggaatccccaaaatgacttacaggca
atgagtagggctcatagaattgggcaacgagaagtagttaacatctaccgatttgttaca
agcaaaagtgttgaggaaaatattctgaagcgagccaagcaaaagatggtacttgatcat
ttggtgattcaaaaactaaatgcagaaggtagactggagaagaaagaatcgaaaaagggg
agttactttgacaaaaatgagctgtcggctattttaaggtttggggcggaggaacttttt
aaggaagacaaaaatgaagaagaaagcaaaaagaggctcttaagtatggatattgatgaa
attcttgaaagagcagagaaagtagaagagaaggaaactggagaggaagggaatgaatta
ttgagtgcttttaaggttgcaaatttcggtagtgctgaagatgatgggagtttctggtcc
cgttggataaaaccagaagctgtagcggaagctgaagatgctttagctccacgtgctgca
agaaataccaagagctatgctgaggctaatcaacctgagagaattagtaaaaggaaaaag
aaggctgctgaaccacaggagagagctcagaagcgccgcaaagcagattatttggttcat
ttagtgccaaggattgagggagcggctgctcaagtaaggggttggtcttatggtaacttg
ccaaagagagatgcatcacgtttttctcgtgcggtattgaaatttggaaaccccagtcaa
attggctcaattgtcatggaggttggtggtacaattgaagcagctccaactgaagcacaa
attgagctttttgatgcattaattgatgggtgtagagaggcagttaaagaaggaaatcta
gacccaaaggggcctatgttggacttttttggtgtcccggtaaaagctaatgaagtactt
aaccgtgttcaagaacttcagctcctagctaagcgcatcagtcgctatgaagatcccatt
gcccagttccgggtgttaatgtacctcaaaccttcaaattggtctaaaggttgtggctgg
aatcagattgacgatgccagattgcttcttggaatacattatcatggatttggcaattgg
gaaaagataagattagatgaaaggctgggtctcacaaaaaagatcgctccagttgaactt
caacaccacgaaaccttcctacctcgtgctcccaacctgaaagaccgtgcttctgcactt
ctggaaatggaacttgtagctgttggtgggaagaacaccaataccaaagctagtcgcaag
acttctaaaaaggagaaggagagagagaatcttatgaatatctcaatatctcgcagcaag
gacaggaaaggaaaacctggttttcctgtaactaacgttcaaatgaggaaggatagatcc
cataaaccccatagagttgaacctttagtgaaagaggagggtgaaatgtccggtaatgaa
gaagtatatgagcagttcagggaagtgaaatggatggaatggtgtgaagatgtcatgaag
acggagattaagaccctgaaccgtcttcacaaattacaaactactagtgctaatcttcca
aaggatttggtgctttcaaaaattcggaagtatttgcagcttcttggacgaaggatagac
caaattgttctggagcatgacaaggaacaatataaacaagacagaatgatcatgaggttg
tggaattacatctcaactttttcaaatttgtctggggagaagcttcgtcagattcattca
aaacttaaacaggagcaagatgaggatggaggggtaggatcatctcatgtcaatggttct
gcatggggccctggtgacaaagacagtgatcctggtcagttcccttcttttcatcgccat
ggtgagagaccaccaagagggtacaaaaatatgtctgcctatcaaacagcagaaccagtt
tctaagagtcatgatgctgggaaatttgaagcatggaaacggaggagaagagctgataat
attaacactcattccctgactcagcccctgcctcaaaggccaatgagcaatggttcccgt
ttacccgatccaaattctttggggattcttggatcaggaccaactgataacagacgtttt
ggtaatgagaagccttctaggatgcgtcaaagtggttatcctccccgacaaggtttctca
tcagttatcaagtag

DBGET integrated database retrieval system